Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,010)
  Primates
(80)
  Rodents
(7,471)
  Mammals
(298)
  Vertebrates
(469)
  Invertebrates
(565)
  Plants
(5,482)
  Bacteria
(1,328)
  Viruses
(9)
  Phages
(0)
  Unclassified
(100)
  All
(32,812)
 
  SAGE NlaIII
(17)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(8,670)
  Tiling Array
(196)
  cDNA Array
(1,336)
  Oligo Array
(6,335)
  Bead Array
(377)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(23)
  HT-Seq
(46)
  Other
(10)
  All
(17,010)
 
  brain
(1,285)
  blood
(3,113)
  connective
(868)
  reproductive
(869)
  muscular
(143)
  digestive
(1,696)
  liver
(1,004)
  lung
(1,276)
  urinary
(226)
  endo/exo-crine
(891)
  embryo
(419)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(322)
  unclassified
(4,898)
  all
(17,010)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM254803 YCU_patient1_CGH1 4,210 Yokohama City University 2008-01-07 [cDNA Array] YCU Human 4.2K version 1 (GPL6340) genomic Homo sapiens
Homo sapiens
unclassified source_name:Female control DNA YCU_patient1 title:YCU_patient1_CGH1 description:Investigation of submicroscopic chromosomal imbalances in patients with MR using YCU Human 4.2k BAC microarray
2 GSM254804 YCU_patient1_CGH2 4,210 Yokohama City University 2008-01-07 [cDNA Array] YCU Human 4.2K version 1 (GPL6340) genomic Homo sapiens
Homo sapiens
unclassified source_name:YCU_patient1 Female control DNA title:YCU_patient1_CGH2 description:Investigation of submicroscopic chromosomal imbalances in patients with MR using YCU Human 4.2k BAC microarray
3 GSM555885 ACC S1 4,095 Yamaguchi University 2010-06-14 [cDNA Array] Macrogen Human BAC clone 4K array (GPL10538) genomic Homo sapiens
Homo sapiens
unclassified source_name:ACC case 1 cells human normal cell (reference) title:ACC S1 description:without PCR
4 GSM555886 ACC S2 4,095 Yamaguchi University 2010-06-14 [cDNA Array] Macrogen Human BAC clone 4K array (GPL10538) genomic Homo sapiens
Homo sapiens
unclassified source_name:ACC case 2 cells human normal cell (reference) title:ACC S2 description:without PCR
5 GSM555887 ACC S3 4,095 Yamaguchi University 2010-06-14 [cDNA Array] Macrogen Human BAC clone 4K array (GPL10538) genomic Homo sapiens
Homo sapiens
unclassified source_name:ACC case 3 cells human normal cell (reference) title:ACC S3 description:without PCR
6 GSM555888 ACC S4 4,095 Yamaguchi University 2010-06-14 [cDNA Array] Macrogen Human BAC clone 4K array (GPL10538) genomic Homo sapiens
Homo sapiens
unclassified source_name:ACC case 4 cells human normal cell (reference) title:ACC S4 description:without PCR
7 GSM555889 ACC S5 4,095 Yamaguchi University 2010-06-14 [cDNA Array] Macrogen Human BAC clone 4K array (GPL10538) genomic Homo sapiens
Homo sapiens
unclassified source_name:ACC case 5 cells human normal cell (reference) title:ACC S5 description:without PCR
8 GSM555890 ACC S6 4,095 Yamaguchi University 2010-06-14 [cDNA Array] Macrogen Human BAC clone 4K array (GPL10538) genomic Homo sapiens
Homo sapiens
unclassified source_name:ACC case 6 cells human normal cell (reference) title:ACC S6 description:without PCR
9 GSM555891 ACC S7 4,095 Yamaguchi University 2010-06-14 [cDNA Array] Macrogen Human BAC clone 4K array (GPL10538) genomic Homo sapiens
Homo sapiens
unclassified source_name:ACC case 7 cells human normal cell (reference) title:ACC S7 description:without PCR
10 GSM555892 ACC S8 4,095 Yamaguchi University 2010-06-14 [cDNA Array] Macrogen Human BAC clone 4K array (GPL10538) genomic Homo sapiens
Homo sapiens
unclassified source_name:ACC case 8 cells human normal cell (reference) title:ACC S8 description:without PCR
11 GSM555893 ACC S9 4,095 Yamaguchi University 2010-06-14 [cDNA Array] Macrogen Human BAC clone 4K array (GPL10538) genomic Homo sapiens
Homo sapiens
unclassified source_name:ACC case 9 cells human normal cell (reference) title:ACC S9 description:without PCR
12 GSM555894 ACC S10 4,095 Yamaguchi University 2010-06-14 [cDNA Array] Macrogen Human BAC clone 4K array (GPL10538) genomic Homo sapiens
Homo sapiens
unclassified source_name:ACC case 10 cells human normal cell (reference) title:ACC S10 description:without PCR
13 GSM506117 control (ch1) vs. infected 4 h (ch2) 45,015 Yakult Honsha Co., Ltd. 2010-02-03 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
unclassified source_name:GCIY cells title:control (ch1) vs. infected 4 h (ch2) description:US22502557_SLOT01_S01_GE2-v5_95_Feb07_1_1.txt
14 GSM506118 BF-1+non-infected (ch1) vs BF-1+infected 4 h (ch2) 45,015 Yakult Honsha Co., Ltd. 2010-02-03 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
unclassified source_name:GCIY cells title:BF-1+non-infected (ch1) vs BF-1+infected 4 h (ch2) description:US22502557_SLOT01_S01_GE2-v5_95_Feb07_1_2.txt
15 GSM506119 infected (ch1) vs BF-1+infected 4 h (ch2) 45,015 Yakult Honsha Co., Ltd. 2010-02-03 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
unclassified source_name:GCIY cells title:infected (ch1) vs BF-1+infected 4 h (ch2) description:US22502557_SLOT01_S01_GE2-v5_95_Feb07_1_3.txt
16 GSM506120 control (ch1) vs. BF-1 4 h (ch2) 45,015 Yakult Honsha Co., Ltd. 2010-02-03 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
unclassified source_name:GCIY cells title:control (ch1) vs. BF-1 4 h (ch2) description:US22502557_SLOT01_S01_GE2-v5_95_Feb07_1_4.txt
17 GSM506121 control (ch1) vs. infected dye-exchage (ch2) 45,015 Yakult Honsha Co., Ltd. 2010-02-03 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
unclassified source_name:GCIY cells title:control (ch1) vs. infected dye-exchage (ch2) description:US22502557_SLOT02_S01_GE2-v5_95_Feb07_1_1.txt
18 GSM506122 BF-1+non-infected (ch1) vs BF-1+infected dye-exchange (ch2) 45,015 Yakult Honsha Co., Ltd. 2010-02-03 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
unclassified source_name:GCIY cells title:BF-1+non-infected (ch1) vs BF-1+infected dye-exchange (ch2) description:US22502557_SLOT02_S01_GE2-v5_95_Feb07_1_2.txt
19 GSM506123 infected (ch1) vs BF-1+infected dye-exchange (ch2) 45,015 Yakult Honsha Co., Ltd. 2010-02-03 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
unclassified source_name:GCIY cells title:infected (ch1) vs BF-1+infected dye-exchange (ch2) description:US22502557_SLOT02_S01_GE2-v5_95_Feb07_1_3.txt
20 GSM506124 control (ch1) vs. BF-1 dye-exchange (ch2) 45,015 Yakult Honsha Co., Ltd. 2010-02-03 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
unclassified source_name:GCIY cells title:control (ch1) vs. BF-1 dye-exchange (ch2) description:US22502557_SLOT02_S01_GE2-v5_95_Feb07_1_4.txt
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