Gene Expression Omnibus (GEO) Overview Version:2013-05-25Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(204)
  Primates
(1)
  Rodents
(191)
  Mammals
(6)
  Vertebrates
(19)
  Invertebrates
(51)
  Plants
(84)
  Bacteria
(74)
  Viruses
(1)
  Phages
(0)
  Unclassified
(1)
  All
(632)
 
  SAGE NlaIII
(4)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(109)
  Tiling Array
(3)
  cDNA Array
(56)
  Oligo Array
(31)
  Bead Array
(1)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(204)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Prediction of graft-versus-host disease in humans by donor gene expression profiling (GSE4624) [cDNA Array] UHNMAC Human 19K v7 (GPL3639) Vaccine and Gene Therapy Institute 2006-04-06 Homo sapiens
Homo sapiens
3,340,800
(19,200 x 174)
174 by_platform
by_series
2 Imiquimod treated Basal Cell Carcinoma (GSE5121) [cDNA Array] CCDTM Hs_CCDTM17.5k (GPL3895) CC/NIH 2006-06-21 Homo sapiens
Homo sapiens
1,212,048
(16,834 x 72)
72 by_platform
by_series
3 Gene expression profiling of primary breast carcinomas from patients at high risk for local recurrence (GSE4913) [cDNA Array] NKI-AVL Homo sapiens 18K cDNA microarray (GPL3558) Netherlands Cancer Institute 2006-05-24 Homo sapiens
Homo sapiens
1,132,800
(19,200 x 59)
59 by_platform
by_series
4 Normal blood cell subtypes (GSE4889) [cDNA Array] LC-33 (GPL3796) Stanford Microarray Database (SMD) 2006-05-22 Homo sapiens
Homo sapiens
1,053,696
(37,632 x 28)
28 by_platform
by_series
5 Array CGH in mentally retarded patients (GSE4884) [cDNA Array] MPIMG Homo sapiens 44K aCGH2_MPIMG_BERLIN (GPL3749) MPIMG 2006-05-22 Homo sapiens
Homo sapiens
937,440
(44,640 x 21)
21 by_platform
by_series
6 Transcriptional profile of breast cancer cell lines after treatment with docetaxel. (GSE5149) [cDNA Array] CNIO Homo sapiens Oncochip 2 (27.648) (GPL4338) IARC 2006-06-25 Homo sapiens
Homo sapiens
857,088
(27,648 x 31)
31 by_platform
by_series
7 Methylation profiling in pediatric medulloblastoma (GSE4857) [cDNA Array] DKFZ CpG Island Chip (GPL3768) German Cancer Research Center 2006-05-17 Homo sapiens
Homo sapiens
736,890
(33,495 x 22)
22 by_platform
by_series
8 Cross-Platform Array Comparative Genomic Hybridization (array CGH) Meta-Analysis (GSE5051) [cDNA Array] VUMC MACF human 5K BAC v21 (GPL3443) Vrije Universiteit Medical Center 2006-06-12 Homo sapiens
Homo sapiens
727,776
(17,328 x 42)
34 8 by_platform
by_series
9 Chromosomal abberations and transcriptional characteristics linked to the pathogenesis of diffuse large b-cell lymphomas (GSE5138) [cDNA Array] VUMC MACF human 5K BAC v21 (GPL3443) Vrije Universiteit Medical Center 2006-06-23 Homo sapiens
Homo sapiens
727,776
(17,328 x 42)
42 by_platform
by_series
10 Prediction of graft-versus-host disease in humans by donor gene expression profiling (GSE4624) [cDNA Array] Canvac Human 7kv2 cDNA Array (GPL3637) Vaccine and Gene Therapy Institute 2006-04-06 Homo sapiens
Homo sapiens
602,112
(7,168 x 84)
84 by_platform
by_series
11 Fibroblasts transcriptome altered by breast cell lines (GSE4708) [cDNA Array] Homo sapiens 4.8K 02-01 amplified cDNA (GPL1930) Fundacao Antonio Prudente 2006-04-24 Homo sapiens
Homo sapiens
489,600
(4,800 x 102)
28 74 by_platform
by_series
12 Molecular Correlate to Gleason Grade in Prostate Adenocarcinoma (GSE5132) [cDNA Array] FHCRC Human Prostate PEDB cDNA Array v4 (GPL3834) Fred Hutchinson Cancer Research Center 2006-06-22 Homo sapiens
Homo sapiens
480,128
(15,488 x 31)
31 by_platform
by_series
13 PGC1alpha overexpression in human white adipose cells (GSE5184) [cDNA Array] SHEA (GPL3941) Hotel-Dieu 2006-06-28 Homo sapiens
Homo sapiens
387,936
(43,104 x 9)
9 by_platform
by_series
14 Washington Human Monocyte Macrophage Profiles (GSE5207) [cDNA Array] UWCEA_HumanHD1 (GPL3966) Seattle Biomedical Research Institute 2006-06-30 Homo sapiens
Homo sapiens
368,640
(7,680 x 48)
48 by_platform
by_series
15 Washington Human Monocyte Macrophage Profiles (GSE5207) [cDNA Array] UWCEA_HumanHD2 (GPL3967) Seattle Biomedical Research Institute 2006-06-30 Homo sapiens
Homo sapiens
368,640
(7,680 x 48)
48 by_platform
by_series
16 Oncostatin M Regulation of Gene Expression in Breast Tumour Cells. (GSE4661) [cDNA Array] CR-UK DMF Human 6.5k genome-wide array (GPL996) University of Birmingham 2006-04-12 Homo sapiens
Homo sapiens
365,568
(13,056 x 28)
28 by_platform
by_series
17 Cross-Platform Array Comparative Genomic Hybridization (array CGH) Meta-Analysis (GSE5051) [cDNA Array] VUMC MACF human 5K BAC v22 (GPL2842) Vrije Universiteit Medical Center 2006-06-12 Homo sapiens
Homo sapiens
363,888
(17,328 x 21)
20 1 by_platform
by_series
18 Array CGH in dendritic cell tumours (GSE4838) [cDNA Array] MPIMG Homo sapiens 44K aCGH2_MPIMG_BERLIN (GPL3749) MPIMG 2006-05-15 Homo sapiens
Homo sapiens
312,480
(44,640 x 7)
7 by_platform
by_series
19 Gene expression profiling of circulating plasma RNA from colorectal cancer patients (GSE4988) [cDNA Array] ResGenHs15K_DIO (GPL3014) CNIO (Spanish National Cancer Center) 2006-06-06 Homo sapiens
Homo sapiens
311,040
(15,552 x 20)
12 8 by_platform
by_series
20 PGC1alpha overexpression in human white adipose cells (GSE5184) [cDNA Array] SHED (GPL3942) Hotel-Dieu 2006-06-28 Homo sapiens
Homo sapiens
301,728
(43,104 x 7)
7 by_platform
by_series
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