Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(2,814)		   Primates
(64)		   Rodents
(344)		   Mammals
(0)		   Vertebrates
(4)		   Invertebrates
(78)		   Plants
(156)		   Bacteria
(477)		   Viruses
(0)		   Phages
(0)		   Unclassified
(9)		   All
(3,946)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(948)		   Tiling Array
(79)		   cDNA Array
(9)		   Oligo Array
(556)		   Bead Array
(1,112)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(54)		   HT-Seq
(56)		   Other
(0)		   All
(2,814)		  
  brain
(0)		   blood
(0)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(9)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(0)		   all
(9)		  
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM116411 1. TGF beta1 differentiated 3D T84 culture 5,184 Pediatric Research Center 2006-06-27 [cDNA Array] Research Genetics (Invitrogen) GF200 microarray filter (GPL3928) RNA Homo sapiens
Homo sapiens		 colon Human intestinal epithelial T84 cells (CCL 2´48, ATCC Rockville, MD, USA)
2 GSM116412 2. TGF beta1 differentiated 3D T84 culture 5,184 Pediatric Research Center 2006-06-27 [cDNA Array] Research Genetics (Invitrogen) GF200 microarray filter (GPL3928) RNA Homo sapiens
Homo sapiens		 colon Human intestinal epithelial T84 cells (CCL 2´48, ATCC Rockville, MD, USA)
3 GSM116413 3. TGF beta1 differentiated 3D T84 culture 5,184 Pediatric Research Center 2006-06-27 [cDNA Array] Research Genetics (Invitrogen) GF200 microarray filter (GPL3928) RNA Homo sapiens
Homo sapiens		 colon Human intestinal epithelial T84 cells (CCL 2´48, ATCC Rockville, MD, USA)
4 GSM116414 1. IMR differentiated 3D T84 culture 5,184 Pediatric Research Center 2006-06-27 [cDNA Array] Research Genetics (Invitrogen) GF200 microarray filter (GPL3928) RNA Homo sapiens
Homo sapiens		 colon Human intestinal epithelial T84 cells (CCL 2´48, ATCC Rockville, MD, USA)
5 GSM116415 2. IMR differentiated 3D T84 culture 5,184 Pediatric Research Center 2006-06-27 [cDNA Array] Research Genetics (Invitrogen) GF200 microarray filter (GPL3928) RNA Homo sapiens
Homo sapiens		 colon Human intestinal epithelial T84 cells (CCL 2´48, ATCC Rockville, MD, USA)
6 GSM116416 3. IMR differentiated 3D T84 culture 5,184 Pediatric Research Center 2006-06-27 [cDNA Array] Research Genetics (Invitrogen) GF200 microarray filter (GPL3928) RNA Homo sapiens
Homo sapiens		 colon Human intestinal epithelial T84 cells (CCL 2´48, ATCC Rockville, MD, USA)
7 GSM116417 1. undifferentiated 3D T84 culture 5,184 Pediatric Research Center 2006-06-27 [cDNA Array] Research Genetics (Invitrogen) GF200 microarray filter (GPL3928) RNA Homo sapiens
Homo sapiens		 colon Human intestinal epithelial T84 cells (CCL 2´48, ATCC Rockville, MD, USA)
8 GSM116418 2. undifferentiated 3D T84 culture 5,184 Pediatric Research Center 2006-06-27 [cDNA Array] Research Genetics (Invitrogen) GF200 microarray filter (GPL3928) RNA Homo sapiens
Homo sapiens		 colon Human intestinal epithelial T84 cells (CCL 2´48, ATCC Rockville, MD, USA)
9 GSM116419 3. undifferentiated 3D T84 culture 5,184 Pediatric Research Center 2006-06-27 [cDNA Array] Research Genetics (Invitrogen) GF200 microarray filter (GPL3928) RNA Homo sapiens
Homo sapiens		 colon Human intestinal epithelial T84 cells (CCL 2´48, ATCC Rockville, MD, USA)
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