Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(19)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(547)
  Tiling Array
(1,153)
  cDNA Array
(493)
  Oligo Array
(950)
  Bead Array
(3)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(2)
  HT-Seq
(1,644)
  Other
(5)
  All
(4,819)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Gene Expression Profiles of Drosophila third instar larvae hemocytes to explain hemocyte development. (GSE10853) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) Yonsei University 2008-03-17 Drosophila melanogaster
Drosophila melanogaster
94,760
(18,952 x 5)
5 by_platform
by_series
2 An integrated strategy for analyzing the unique developmental program of different myoblast subtypes (GSE3854) [GeneChip] [DrosGenome1] Affymetrix Drosophila Genome Array (GPL72) Wyeth Research 2005-12-16 Drosophila melanogaster
Drosophila melanogaster
756,540
(14,010 x 54)
45 9 by_platform
by_series
3 Epigenetically heritable alteration of fly development in response to toxic challenge (GSE36486) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) Weizmann Institute of Science 2012-03-13 Drosophila melanogaster
Drosophila melanogaster
113,712
(18,952 x 6)
6 by_platform
by_series
4 Comparison between mRNAs of how germ-line clones embryos and WT embryos at 3-5 h AEL (GSE7772) [GeneChip] [DrosGenome1] Affymetrix Drosophila Genome Array (GPL72) Weizmann Institute 2007-05-10 Drosophila melanogaster
Drosophila melanogaster
56,040
(14,010 x 4)
4 by_platform
by_series
5 Expression profiling of Ciona intestinalis neurula and mid-tailbud stage embryos expressing altered forms of the transcription factor Ci-Tbx2/3 in the notochord (GSE42267) [GeneChip] [CINT06a520380F] Affymetrix Ciona intestinalis custom-designed array (GPL15657) Weill Cornell Medical College 2012-11-14 Ciona intestinalis
Ciona intestinalis
526,473
(30,969 x 17)
17 by_platform
by_series
6 MSL2 is required for upregulation of male X chromosome but not for expression of autosomal genes (GSE12054) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) Wayne State University 2008-07-09 Drosophila melanogaster
Drosophila melanogaster
113,712
(18,952 x 6)
6 by_platform
by_series
7 roX RNAs are not required for expressional regulation in Drosophila females (GSE12076) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) Wayne State University 2008-07-10 Drosophila melanogaster
Drosophila melanogaster
113,712
(18,952 x 6)
6 by_platform
by_series
8 roX RNAs are required for up-regulation of male X chromosome in Drosophila. (GSE3990) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) Wayne State University 2006-01-06 Drosophila melanogaster
Drosophila melanogaster
113,712
(18,952 x 6)
6 by_platform
by_series
9 Virulence differences in Toxoplasma mediated by amplification of polymorphic pseudokinases. (GSE24905) [GeneChip] Affymetrix Toxoplasma gondii GeneChip Individual Expression Probes (Tgondiia520372) (GPL11065) Washington University School of Medicine 2010-10-25 Toxoplasma gondii
Toxoplasma gondii
5,036,220
(102,780 x 49)
49 by_platform
by_series
10 Expression and genomic hybridization data for the Toxoplasma gondii I X III cross (GSE26608) [GeneChip] [Tgondiia520372] Affymetrix Toxoplasma gondii Custom GeneChip (CDF: Tgondiia520372minusI_IIIsnp) (GPL11447) Washington University School of Medicine 2011-01-13 Toxoplasma gondii
Toxoplasma gondii
1,067,310
(9,045 x 118)
118 by_platform
by_series
11 Expression Quantitative Trait Locus (eQTL) Mapping of Stage-specific Gene Expression in Progeny from a type I X III Genetic Cross of Toxoplasma gondii (GSE26558) [GeneChip] [Tgondiia520372] Affymetrix Toxoplasma gondii Custom GeneChip (CDF: Tgondiia520372minusI_IIIsnp) (GPL11447) Washington University School of Medicine 2011-01-11 Toxoplasma gondii
Toxoplasma gondii
723,600
(9,045 x 80)
80 by_platform
by_series
12 Genomic hybridizations for the parents and progeny of the Toxoplasma gondii I X III genetic cross (GSE26607) [GeneChip] [Tgondiia520372] Affymetrix Toxoplasma gondii Custom GeneChip (CDF: Tgondiia520372minusI_IIIsnp) (GPL11447) Washington University School of Medicine 2011-01-13 Toxoplasma gondii
Toxoplasma gondii
343,710
(9,045 x 38)
38 by_platform
by_series
13 Coordinated Progression Through Two Subtranscriptomes Underlies the Tachyzoite Cycle of Toxoplasma gondii (GSE19092) [GeneChip] [Tgondiia520372] Affymetrix Toxoplasma gondii Custom GeneChip (CDF: ToxoDB version 4) (GPL7186) Washington University School of Medicine 2009-11-18 Toxoplasma gondii
Toxoplasma gondii
253,260
(9,045 x 28)
28 by_platform
by_series
14 Expression data from control and high sugar-fed third instar Drosophila larvae (GSE30020) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) Washington University School of Medicine 2011-06-16 Drosophila melanogaster
Drosophila melanogaster
227,424
(18,952 x 12)
12 by_platform
by_series
15 Expression data from third instar Drosophila larvae offspring from maternal control or high-sucrose fed diets (GSE33989) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) Washington University School of Medicine 2011-11-29 Drosophila melanogaster
Drosophila melanogaster
113,712
(18,952 x 6)
6 by_platform
by_series
16 Types I GT1, II Me49, III CTGara strains - tachyzoite and Compound 1 (GSE16037) [GeneChip] [Tgondiia520372] Affymetrix Toxoplasma gondii Custom GeneChip (CDF: ToxoDB version 4) (GPL7186) Washington University School of Medicine 2009-05-10 Toxoplasma gondii
Toxoplasma gondii
108,540
(9,045 x 12)
12 by_platform
by_series
17 Global gene expression differences between GT1, RH-ERP2009 and RH-JSR (GSE16115) [GeneChip] [Tgondiia520372] Affymetrix Toxoplasma gondii Custom GeneChip (CDF: ToxoDB version 4) (GPL7186) Washington University School of Medicine 2009-05-14 Toxoplasma gondii
Toxoplasma gondii
81,405
(9,045 x 9)
9 by_platform
by_series
18 Global transcriptome analysis indicates that depletion of rps13 and ribosomes leads to cell cycle arrest in G1 (GSE20616) [GeneChip] [Tgondiia520372] Affymetrix Toxoplasma gondii Custom GeneChip (CDF: ToxoDB version 4) (GPL7186) Washington University School of Medicine 2010-03-03 Toxoplasma gondii
Toxoplasma gondii
72,360
(9,045 x 8)
8 by_platform
by_series
19 Cell cycle-dependent, intercellular transmission of Toxoplasma gondii is accompanied by marked changes in parasite gene expression. (GSE20480) [GeneChip] [Tgondiia520372] Affymetrix Toxoplasma gondii Custom GeneChip (CDF: ToxoDB version 4) (GPL7186) Washington University School of Medicine 2010-02-22 Toxoplasma gondii
Toxoplasma gondii
54,270
(9,045 x 6)
6 by_platform
by_series
20 Molecular Organization of Drosophila Neuroendocrine Cells by DIMMED: Global Profiling of Pan-Neuronal DIMMED Expression Effects (GSE31113) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) Washington University in St Louis School of Medicine 2011-08-01 Drosophila melanogaster
Drosophila melanogaster
151,616
(18,952 x 8)
8 by_platform
by_series
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