Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,010)
  Primates
(80)
  Rodents
(7,471)
  Mammals
(298)
  Vertebrates
(469)
  Invertebrates
(565)
  Plants
(5,482)
  Bacteria
(1,328)
  Viruses
(9)
  Phages
(0)
  Unclassified
(100)
  All
(32,812)
 
  SAGE NlaIII
(2)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(197)
  Tiling Array
(50)
  cDNA Array
(0)
  Oligo Array
(313)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(3)
  Other
(0)
  All
(565)
 
  brain
(10)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(6)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(12)
  unclassified
(169)
  all
(197)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM162972 trypomastigote 54,675 Juntendo University Graduate School of Medicine 2007-02-16 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Trypanosoma cruzi
Trypanosoma cruzi
unclassified source_name:trypomastigote title:trypomastigote description:control sample to check the cross-hybridization between T.cruzi cRNA and human chip
2 GSM1048197 WT incubated with H2O, biological rep1 22,625 Nagoya University 2012-12-04 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:C. elegans WT animal incubated with H2O for 1 hour title:WT incubated with H2O, biological rep1 description:Gene expression data from WT adult worm incubated with H2O for 1 hr.
3 GSM1048198 WT incubated with 1mM copper sulfate, biological rep1 22,625 Nagoya University 2012-12-04 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:C. elegans WT animal incubated with copper sulfate for 1 hour title:WT incubated with 1mM copper sulfate, biological rep1 description:Gene expression data from WT adult worm incubated with copper sulfate for 1 hr.
4 GSM1048199 kgb-1 incubated with H2O, biological rep1 22,625 Nagoya University 2012-12-04 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:C. elegans kgb-1 mutant animal incubated with H2O for 1 hour title:kgb-1 incubated with H2O, biological rep1 description:Gene expression data from kgb-1 mutant adult worm incubated with H2O for 1 hr.
5 GSM1048200 kgb-1 incubated with 1mM copper sulfate, biological rep1 22,625 Nagoya University 2012-12-04 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:C. elegans kgb-1 mutant animal incubated with copper sulfate for 1 hour title:kgb-1 incubated with 1mM copper sulfate, biological rep1 description:Gene expression data from kgb-1 mutant adult worm incubated with copper sulfate for 1 hr.
6 GSM311471 N2-controlRNAi-fed-biological rep1 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-controlRNAi-fed-biological rep1 title:N2-controlRNAi-fed-biological rep1 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on control RNAi plates and fed ad libitum.
7 GSM311472 N2-controlRNAi-fed-biological rep2 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-controlRNAi-fed-biological rep2 title:N2-controlRNAi-fed-biological rep2 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on control RNAi plates and fed ad libitum.
8 GSM311473 N2-controlRNAi-fed-biological rep3 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-controlRNAi-fed-biological rep3 title:N2-controlRNAi-fed-biological rep3 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on control RNAi plates and fed ad libitum.
9 GSM311474 N2-controlRNAi-fed-biological rep4 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-controlRNAi-fed-biological rep4 title:N2-controlRNAi-fed-biological rep4 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on control RNAi plates and fed ad libitum.
10 GSM311475 N2-controlRNAi-fed-biological rep5 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-controlRNAi-fed-biological rep5 title:N2-controlRNAi-fed-biological rep5 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on control RNAi plates and fed ad libitum.
11 GSM311476 N2-controlRNAi-fasting-biological rep1 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-controlRNAi-fasting-biological rep1 title:N2-controlRNAi-fasting-biological rep1 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on control RNAi plates and fasted for 48 h.
12 GSM311477 N2-controlRNAi-fasting-biological rep2 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-controlRNAi-fasting-biological rep2 title:N2-controlRNAi-fasting-biological rep2 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on control RNAi plates and fasted for 48 h.
13 GSM311478 N2-controlRNAi-fasting-biological rep3 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-controlRNAi-fasting-biological rep3 title:N2-controlRNAi-fasting-biological rep3 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on control RNAi plates and fasted for 48 h.
14 GSM311479 N2-controlRNAi-fasting-biological rep4 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-controlRNAi-fasting-biological rep4 title:N2-controlRNAi-fasting-biological rep4 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on control RNAi plates and fasted for 48 h.
15 GSM311480 N2-controlRNAi-fasting-biological rep5 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-controlRNAi-fasting-biological rep5 title:N2-controlRNAi-fasting-biological rep5 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on control RNAi plates and fasted for 48 h.
16 GSM311481 N2-Cel-RhebRNAi-fed-biological rep1 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-Cel-RhebRNAi-fed-biological rep1 title:N2-Cel-RhebRNAi-fed-biological rep1 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on Cel-Rheb RNAi plates and fed ad libitum.
17 GSM311482 N2-Cel-RhebRNAi-fed-biological rep2 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-Cel-RhebRNAi-fed-biological rep2 title:N2-Cel-RhebRNAi-fed-biological rep2 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on Cel-Rheb RNAi plates and fed ad libitum.
18 GSM311483 N2-Cel-RhebRNAi-fed-biological rep3 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-Cel-RhebRNAi-fed-biological rep3 title:N2-Cel-RhebRNAi-fed-biological rep3 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on Cel-Rheb RNAi plates and fed ad libitum.
19 GSM311484 N2-Cel-RhebRNAi-fed-biological rep4 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-Cel-RhebRNAi-fed-biological rep4 title:N2-Cel-RhebRNAi-fed-biological rep4 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on Cel-Rheb RNAi plates and fed ad libitum.
20 GSM311485 N2-Cel-RhebRNAi-fasting-biological rep1 22,625 Graduate School of Biostudies, Kyoto University 2008-08-11 [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Wild Type N2, N2-Cel-RhebRNAi-fasting-biological rep1 title:N2-Cel-RhebRNAi-fasting-biological rep1 description:Gene expression data from wild type worms at day 4 of adulthood. Worms were grown on Cel-Rheb RNAi plates and fasted for 48 h.
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