Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Invertebrates
(1,032)

Plants
(2,239)

Bacteria
(1,690)

SAGE RsaI
(0)

SAGE Sau3A
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(1)

HT-Seq
(257)

Other
(6)

All
(1,032)

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	Platform ID	Title	Number of the probes	Institute	Submission date	Manufacturer	Species	Platform class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GPL6946	MIT Caenorhabditis elegans small RNA sequences (Illumina/Solexa)	11,205,620	UCSF	2008-06-10		Caenorhabditis elegans	HT Sequencing	other, MIT Caenorhabditis elegans small RNA sequences (Illumina/Solexa),
2	GPL6817	SKI D. melanogaster small RNA sequenced by Solexa	5,222,148	Sloan-Kettering Institute	2008-05-05		Drosophila melanogaster	HT Sequencing	other, SKI D. melanogaster small RNA sequenced by Solexa,
3	GPL6573	SKI Drosophila melanogaster small RNA sequenced by Solexa	1,387,144	Sloan-Kettering Institute	2008-03-11		Drosophila melanogaster	HT Sequencing	other, SKI Drosophila melanogaster small RNA sequenced by Solexa,
4	GPL6700	Hannon Lab Solexa Drosophila melanogaster	1,256,687	Cold Spring Harbor Labs	2008-04-07		Drosophila melanogaster	HT Sequencing	other, Hannon Lab Solexa Drosophila melanogaster,
5	GPL5061	MIT/WI Bartel D. melanogaster 454 2007	753,797	UCSF	2007-04-03	454 Life Sciences, Brantford, CT	Drosophila melanogaster	HT Sequencing	other, MIT/WI Bartel D. melanogaster 454 2007,
6	GPL6072	Drosophila melanogaster small RNA sequence by Solexa	347,863	Sloan-Kettering Institute	2007-10-31		Drosophila melanogaster	HT Sequencing	other, Drosophila melanogaster small RNA sequence by Solexa,
7	GPL6664	Drosophila melanogaster deep-sequencing small RNAs	255,670	University of Massachusetts Medical School	2008-03-30	Illumina-Solexa GA deep-sequencer	Drosophila melanogaster	HT Sequencing	other, Drosophila melanogaster deep-sequencing small RNAs,
8	GPL6024	UMMS Drosophila melanogaster 454 sequenced small RNAs	59,906	University of Massachusetts Medical School	2007-10-21	454	Drosophila melanogaster	HT Sequencing	other, UMMS Drosophila melanogaster 454 sequenced small RNAs, The "expected miRNA* extremities" are the extremities described in miRBase ( http://microrna.sanger.ac.uk/sequences/ ) for the few miRNAs which have been experimentally validated; for the others, the miRNA sequence (as annotated in miRBAse) was used to infer the sequence of the corresponding miRNA (this is called "conceptual dicing"). All these annotations were based on the latest release of miRBase (release 10.0, August 2007).
9	GPL6197	D. simulans Male Head 454 2007	26,336	University of Chicago	2007-12-01	454 Life Sciences, Brantford, CT	Drosophila simulans	HT Sequencing	other, D. simulans Male Head 454 2007,
10	GPL8270	Caenorhabditis elegans small RNAs (454 GS FLX system)	23,327	Hubrecht Institute	2009-03-10	Hubrecht Institute-KNAW & Univeristy Medical Center Utrecht	Caenorhabditis elegans	HT Sequencing	other, Caenorhabditis elegans small RNAs (454 GS FLX system),
11	GPL6452	Siomi Lab fruit fly S2 AGO2 Annotation Results v1.0 (454 sequencing).	23,252	National Institute of Advanced Industrial Science and Technology	2008-05-08		Drosophila melanogaster	HT Sequencing	other, Siomi Lab fruit fly S2 AGO2 Annotation Results v1.0 (454 sequencing)., Drosophila endogenous small RNAs bind to Argonaute2 in somatic cells 2008 Annotation Results
12	GPL6198	D. pseudoobscura Male Head 454 2007	18,978	University of Chicago	2007-12-01	454 Life Sciences, Brantford, CT	Drosophila pseudoobscura	HT Sequencing	other, D. pseudoobscura Male Head 454 2007,
13	GPL8272	Caenorhabditis remanei small RNAs (454 GS FLX system)	16,812	Hubrecht Institute	2009-03-10	Hubrecht Institute-KNAW & Univeristy Medical Center Utrecht	Caenorhabditis remanei	HT Sequencing	other, Caenorhabditis remanei small RNAs (454 GS FLX system),
14	GPL8271	Caenorhabditis briggsae small RNAs (454 GS FLX system)	14,661	Hubrecht Institute	2009-03-10	Hubrecht Institute-KNAW & Univeristy Medical Center Utrecht	Caenorhabditis briggsae	HT Sequencing	other, Caenorhabditis briggsae small RNAs (454 GS FLX system),
15	GPL8273	Pristionchus pacificus small RNAs (454 GS FLX system)	11,549	Hubrecht Institute	2009-03-10	Hubrecht Institute-KNAW & Univeristy Medical Center Utrecht	Pristionchus pacificus	HT Sequencing	other, Pristionchus pacificus small RNAs (454 GS FLX system),
16	GPL6196	D. melanogaster Male Head 454 2007	8,527	University of Chicago	2007-12-01	454 Life Sciences, Brantford, CT	Drosophila melanogaster	HT Sequencing	other, D. melanogaster Male Head 454 2007,
17	GPL7074	Ding Lab fruit fly S2 cell small RNAs (454 sequencing)	2,967	UC Riverside	2008-07-20		Drosophila melanogaster	HT Sequencing	other, Ding Lab fruit fly S2 cell small RNAs (454 sequencing),
18	GPL10061	Illumina Genome Analyzer II (Drosophila yakuba)	0		2010-02-17		Drosophila yakuba	HT Sequencing	high-throughput sequencing, Illumina Genome Analyzer II (Drosophila yakuba),
19	GPL10069	Illumina Genome Analyzer II (Drosophila melanogaster x Drosophila sechellia)	0		2010-02-19		Drosophila melanogaster x Drosophila sechellia	HT Sequencing	high-throughput sequencing, Illumina Genome Analyzer II (Drosophila melanogaster x Drosophila sechellia),
20	GPL10070	Illumina Genome Analyzer II (Drosophila melanogaster; Drosophila sechellia)	0		2010-02-19		Drosophila melanogaster,Drosophila sechellia	HT Sequencing	high-throughput sequencing, Illumina Genome Analyzer II (Drosophila melanogaster; Drosophila sechellia),

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