Gene Expression Omnibus (GEO) Overview Version：2013-05-25Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,438)		   Primates
(205)		   Rodents
(12,530)		   Mammals
(774)		   Vertebrates
(1,152)		   Invertebrates
(3,917)		   Plants
(6,619)		   Bacteria
(2,962)		   Viruses
(50)		   Phages
(4)		   Unclassified
(282)		   All
(46,983)		  
  SAGE NlaIII
(19)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(1)		   GeneChip
(501)		   Tiling Array
(1,102)		   cDNA Array
(470)		   Oligo Array
(838)		   Bead Array
(3)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(2)		   HT-Seq
(976)		   Other
(5)		   All
(3,917)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 [E-MTAB-652] CID island ChIP (GSE30997) [HT Sequencing] Illumina Genome Analyzer IIx (Drosophila melanogaster) (GPL11203) European Bioinformatics Institute 2011-07-27 Drosophila melanogaster
Drosophila melanogaster		 2
(0 x 2) 		2 by_platform
by_series
2 [E-MTAB-636] Plasmodium yoelii RNA-Seq (GSE30620) [HT Sequencing] Illumina Genome Analyzer II (Plasmodium yoelii) (GPL13902) European Bioinformatics Institute 2011-07-12 Plasmodium yoelii
Plasmodium yoelii		 5
(0 x 5) 		5 by_platform
by_series
3 [E-MTAB-607] Transcription profiling by high throughput sequencing of the planarian Schmidtea mediterranea during head regeneration (GSE30996) [HT Sequencing] Illumina Genome Analyzer II (Schmidtea mediterranea) (GPL13982) European Bioinformatics Institute 2011-07-27 Schmidtea mediterranea
Schmidtea mediterranea		 7
(0 x 7) 		7 by_platform
by_series
4 [E-MTAB-607] Transcription profiling by high throughput sequencing of the planarian Schmidtea mediterranea during head regeneration (GSE30996) [HT Sequencing] AB SOLiD System 3.0 (Schmidtea mediterranea) (GPL13983) European Bioinformatics Institute 2011-07-27 Schmidtea mediterranea
Schmidtea mediterranea		 4
(0 x 4) 		4 by_platform
by_series
5 [E-MTAB-550] Toxoplasma gondii RNASeq (GSE30614) [HT Sequencing] Illumina Genome Analyzer II (Toxoplasma gondii) (GPL13897) European Bioinformatics Institute 2011-07-12 Toxoplasma gondii
Toxoplasma gondii		 14
(0 x 14) 		14 by_platform
by_series
6 [E-MTAB-549] Neospora caninum RNAseq (GSE30613) [HT Sequencing] Illumina Genome Analyzer II (Neospora caninum) (GPL13896) European Bioinformatics Institute 2011-07-12 Neospora caninum
Neospora caninum		 6
(0 x 6) 		6 by_platform
by_series
7 [E-MTAB-549] Neospora caninum RNAseq (GSE30613) [HT Sequencing] Illumina Genome Analyzer (Neospora caninum) (GPL13895) European Bioinformatics Institute 2011-07-12 Neospora caninum
Neospora caninum		 4
(0 x 4) 		4 by_platform
by_series
8 [E-MTAB-533] GENCODE Targeted Sequencing Batch III (GSE30612) [HT Sequencing] Illumina Genome Analyzer II (Caenorhabditis elegans) (GPL9269) European Bioinformatics Institute 2011-07-12 Caenorhabditis elegans
Caenorhabditis elegans		 1
(0 x 1) 		1 by_platform
by_series
9 [E-MTAB-475] Trypanosoma vivax Y486 bloodstream stage RNAseq (GSE30609) [HT Sequencing] Illumina Genome Analyzer II (Trypanosoma vivax) (GPL13893) European Bioinformatics Institute 2011-07-12 Trypanosoma vivax
Trypanosoma vivax		 1
(0 x 1) 		1 by_platform
by_series
10 [E-MTAB-451] Schistosoma mansoni transcriptomics at different life stages (GSE30607) [HT Sequencing] Illumina Genome Analyzer II (Schistosoma mansoni) (GPL13892) European Bioinformatics Institute 2011-07-12 Schistosoma mansoni
Schistosoma mansoni		 12
(0 x 12) 		12 by_platform
by_series
11 [E-MTAB-315] RNA-seq of Drosophila S2 cells after RNAi knock-down of signal transduction components (GSE30602) [HT Sequencing] AB SOLiD System 3.0 (Drosophila melanogaster) (GPL10942) European Bioinformatics Institute 2011-07-12 Drosophila melanogaster
Drosophila melanogaster		 64
(0 x 64) 		64 by_platform
by_series
12 [E-MTAB-214] ChiP-seq profiling of Drosophila melanogaster salivary glands to identify targets for NSL1 and MCRS2. (GSE25709) [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) European Bioinformatics Institute 2010-11-30 Drosophila melanogaster
Drosophila melanogaster		 3
(0 x 3) 		3 by_platform
by_series
13 Zelda binding in the early Drosophila melanogaster embryo marks regions subsequently activated at the maternal-to-zygotic transition (GSE30757) [HT Sequencing] Illumina Genome Analyzer IIx (Drosophila melanogaster) (GPL11203) Hebrew University 2011-07-18 Drosophila melanogaster
Drosophila melanogaster		 3
(0 x 3) 		3 by_platform
by_series
14 X chromosome dosage compensation via enhanced transcriptional elongation in Drosophila males (Untreated) (GSE25321) [HT Sequencing] Illumina Genome Analyzer II (Drosophila melanogaster) (GPL9061) Harvard Medical School 2010-11-12 Drosophila melanogaster
Drosophila melanogaster		 3
(0 x 3) 		3 by_platform
by_series
15 X chromosome dosage compensation via enhanced transcriptional elongation in Drosophila males (Control & MSL2 RNAi) (GSE25887) [HT Sequencing] Illumina Genome Analyzer II (Drosophila melanogaster) (GPL9061) Harvard Medical School 2010-12-07 Drosophila melanogaster
Drosophila melanogaster		 12
(0 x 12) 		12 by_platform
by_series
16 Widespread Generation of Alternative UTRs Contributes to Sex-specific RNA Binding by UNR (GSE33178) [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) Università di Milano 2011-10-24 Drosophila melanogaster
Drosophila melanogaster		 10
(0 x 10) 		10 by_platform
by_series
17 Whole transcriptome profiling of successful immune response to Vibrio infections in the oyster Crassostrea gigas by digital gene expression analysis (GSE33390) [HT Sequencing] Illumina Genome Analyzer (Crassostrea gigas) (GPL9389) Skuld Tech 2011-11-01 Crassostrea gigas
Crassostrea gigas		 4
(0 x 4) 		4 by_platform
by_series
18 Whole Transcriptome analysis of the coral acropora millepora reveals complex responses to ocean acidification during the initiation of calcification (GSE33016) [HT Sequencing] Illumina Genome Analyzer IIx (Acropora millepora) (GPL14749) James Cook University 2011-10-17 Acropora millepora
Acropora millepora		 9
(0 x 9) 		3 6 by_platform
by_series
19 Whole transcriptome analysis of a reversible neurodegenerative process in Drosophila reveals potential neuroprotective genes (GSE38664) [HT Sequencing] Illumina Genome Analyzer II (Drosophila melanogaster) (GPL9061) CIC bioGUNE 2012-06-12 Drosophila melanogaster
Drosophila melanogaster		 14
(0 x 14) 		14 by_platform
by_series
20 Whole genome bisulfite sequencing of Entamoeba histolytica (GSE31295) [HT Sequencing] Illumina Genome Analyzer IIx (Entamoeba histolytica) (GPL14131) German Center for Cancer Research 2011-08-09 Entamoeba histolytica
Entamoeba histolytica		 1
(0 x 1) 		1 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [49]
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