Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(19)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(1)		   GeneChip
(482)		   Tiling Array
(1,098)		   cDNA Array
(469)		   Oligo Array
(816)		   Bead Array
(3)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(2)		   HT-Seq
(901)		   Other
(5)		   All
(3,796)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Whole transcriptome analysis of rosetting Plasmodium falciparum parasites (GSE28990) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 IGR+ORF 16.8K v1.0 (GPL11250) Edinburgh university 2011-04-29 Plasmodium falciparum
Plasmodium falciparum		 201,288
(16,774 x 12) 		12 by_platform
by_series
2 Artemisinin resistance in Plasmodium falciparum is associated with an altered temporal pattern of transcription (CGH) (GSE25879) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 IGR+ORF 16.8K v1.0 (GPL11250) Nanyang Technological University, School of Biological Sciences 2010-12-06 Plasmodium falciparum
Plasmodium falciparum		 167,740
(16,774 x 10) 		10 by_platform
by_series
3 Artemisinin resistance in Plasmodium falciparum is associated with an altered temporal pattern of transcription (GSE25883) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 IGR+ORF 16.8K v1.0 (GPL11250) Nanyang Technological University, School of Biological Sciences 2010-12-06 Plasmodium falciparum
Plasmodium falciparum		 167,740
(16,774 x 10) 		10 by_platform
by_series
4 Structural polymorphism in the promoter of pfmrp2 confers tolerance to mefloquine and chloroquine in Plasmodium falciparum [CGH] (GSE44128) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 IGR+ORF 16.8K v1.0 (GPL11250) Nanyang Technological University, School of Biological Sciences 2013-02-06 Plasmodium falciparum
Plasmodium falciparum		 33,548
(16,774 x 2) 		2 by_platform
by_series
5 Structural polymorphism in the promoter of pfmrp2 confers tolerance to mefloquine and chloroquine in Plasmodium falciparum. (GSE44129) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 IGR+ORF 16.8K v1.0 (GPL11250) Nanyang Technological University, School of Biological Sciences 2013-02-06 Plasmodium falciparum
Plasmodium falciparum		 33,548
(16,774 x 2) 		2 by_platform
by_series
6 Artemisinin resistance in Plasmodium falciparum is associated with an altered temporal pattern of transcription (expression) (GSE25878) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 11.4K v1.1 (GPL11248) Nanyang Technological University, School of Biological Sciences 2010-12-06 Plasmodium falciparum
Plasmodium falciparum		 1,034,852
(11,372 x 91) 		91 by_platform
by_series
7 Artemisinin resistance in Plasmodium falciparum is associated with an altered temporal pattern of transcription (GSE25883) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 11.4K v1.1 (GPL11248) Nanyang Technological University, School of Biological Sciences 2010-12-06 Plasmodium falciparum
Plasmodium falciparum		 1,034,852
(11,372 x 91) 		91 by_platform
by_series
8 Whole transcriptome analysis identifies a subset of Group A var genes that encode the malaria parasite ligands for binding to human brain endothelial cells (GSE32211) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 11.4K v1.1 (GPL11248) Edinburgh university 2011-09-19 Plasmodium falciparum
Plasmodium falciparum		 534,484
(11,372 x 47) 		47 by_platform
by_series
9 Mutually Exclusive Transcription of Subtelomeric Gene Families in Plasmodium falciparum is Restricted to var Genes (GSE31829) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 11.4K v1.1 (GPL11248) Nanyang Technological University 2011-09-01 Plasmodium falciparum
Plasmodium falciparum		 409,392
(11,372 x 36) 		36 by_platform
by_series
10 Structural polymorphism in the promoter of pfmrp2 confers tolerance to mefloquine and chloroquine in Plasmodium falciparum [expression] (GSE44127) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 11.4K v1.1 (GPL11248) Nanyang Technological University, School of Biological Sciences 2013-02-06 Plasmodium falciparum
Plasmodium falciparum		 272,928
(11,372 x 24) 		24 by_platform
by_series
11 Structural polymorphism in the promoter of pfmrp2 confers tolerance to mefloquine and chloroquine in Plasmodium falciparum. (GSE44129) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 11.4K v1.1 (GPL11248) Nanyang Technological University, School of Biological Sciences 2013-02-06 Plasmodium falciparum
Plasmodium falciparum		 272,928
(11,372 x 24) 		24 by_platform
by_series
12 Comparative gene expression profiling of P. falciparum malaria parasites exposed to three different histone deacetylase inhibitors (GSE25642) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 11.4K v1.1 (GPL11248) Nanyang Technological University 2010-11-29 Plasmodium falciparum
Plasmodium falciparum		 250,184
(11,372 x 22) 		22 by_platform
by_series
13 Identification of a New Chemical Class of Antimalarials, ACT-213615 (GSE39485) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 11.4K v1.1 (GPL11248) Nanyang Technological University 2012-07-19 Plasmodium falciparum
Plasmodium falciparum		 113,720
(11,372 x 10) 		10 by_platform
by_series
14 Quantitative time-course profiling of Plasmodium falciparum transcripts and proteins throughout the 48-hour intraerythrocytic developmental cycle (GSE24416) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 11.0K v1.1 (GPL10991) Nanyang Technological University 2010-09-28 Plasmodium falciparum
Plasmodium falciparum		 264,120
(11,005 x 24) 		24 by_platform
by_series
15 Transcriptional profiling of growth perturbations of the human malaria parasite Plasmodium falciparum (GSE19468) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 10.4K v1.0 (GPL7493) Nanyang Technological Unversity 2009-12-14 Plasmodium falciparum
Plasmodium falciparum		 2,572,752
(10,416 x 247) 		247 by_platform
by_series
16 Comparison of relative transcript and protein abundance in Plasmodium falciparum schizont stage parasites (GSE13251) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 3D7 10.4K v1.0 (GPL7493) Nanyang Technological University 2008-10-17 Plasmodium falciparum
Plasmodium falciparum		 41,664
(10,416 x 4) 		4 by_platform
by_series
17 P. falciparum (lab strain DD2) treated with ionomycin vs untreated [CGH] (GSE33605) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 11K v1.1 (GPL14830) Nanyang Technological University, School of Biological Sciences 2011-11-10 Plasmodium falciparum
Plasmodium falciparum		 33,015
(11,005 x 3) 		3 by_platform
by_series
18 P. falciparum (lab strain DD2) treated with A23187 vs untreated [CGH] (GSE33764) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 11K v1.1 (GPL14830) Nanyang Technological University, School of Biological Sciences 2011-11-17 Plasmodium falciparum
Plasmodium falciparum		 33,015
(11,005 x 3) 		3 by_platform
by_series
19 P. falciparum (lab strain 3d7) schizonts vs. P. falciparum (lab strain 3d7) reference RNA pool (GSE33868) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 10.4K v1.0 (GPL14831) Nanyang Technological University, School of Biological Sciences 2011-11-22 Plasmodium falciparum 3D7
Plasmodium falciparum 3D7		 156,240
(10,416 x 15) 		15 by_platform
by_series
20 extracellular calcium chelation experiment_P. falciparum (lab strain 3d7) schizonts vs P. falciparum (lab strain 3d7) reference RNA pool (GSE33869) [Oligo Array] ZB/SBS-NTU Plasmodium falciparum 10.4K v1.0 (GPL14831) Nanyang Technological University, School of Biological Sciences 2011-11-22 Plasmodium falciparum 3D7
Plasmodium falciparum 3D7		 156,240
(10,416 x 15) 		15 by_platform
by_series
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