Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(3,985)
  Primates
(80)
  Rodents
(1,907)
  Mammals
(359)
  Vertebrates
(450)
  Invertebrates
(1,139)
  Plants
(2,490)
  Bacteria
(1,901)
  Viruses
(90)
  Phages
(11)
  Unclassified
(542)
  All
(13,032)
 
  SAGE NlaIII
(20)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(30)
  Tiling Array
(120)
  cDNA Array
(217)
  Oligo Array
(425)
  Bead Array
(2)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(1)
  HT-Seq
(312)
  Other
(8)
  All
(1,139)
 
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL5922 PIWI-associated piRNA in Drosophila melanogaster ovary 13,299 Yale University Stem Cell Center 2007-09-23 Drosophila melanogaster
Drosophila melanogaster
Other other, PIWI-associated piRNA in Drosophila melanogaster ovary,
2 GPL5734 Dictyostelium discoideum small RNA sequences 2,673 Uppsala University 2007-08-13 Dictyostelium discoideum
Dictyostelium discoideum
Other other, Dictyostelium discoideum small RNA sequences,
3 GPL9968 Allergochip for asthma diagnosis 103 University of Perugia 2010-01-24 Crisanti's Lab-Imperial College Dermatophagoides pteronyssinus
Dermatophagoides pteronyssinus
Other spotted peptide or protein, Allergochip for asthma diagnosis,
4 GPL18316 PfPv500 version1 1,015 University of California Irvine 2014-02-21 Antigen Discovery Inc. Plasmodium falciparum,Plasmodium vivax
Plasmodium falciparum,Plasmodium vivax
Other spotted peptide or protein, PfPv500 version1, The arrays used in this study came from a commercially available source, Antigen Discovery Inc. (Irvine, CA). It features 500 Plasmodium falciparum and 500 P. vivax ORFs spotted as in vitro rapid translation/transcription (IVTT) reactions, and some additional purified proteins, onto nitrocellulose-coated slides. Multiple spots consisting of reactions lacking plasmid templates ('no DNA' controls) are present on each array and used for data normalization. The array is called PfPv500 version1.
5 GPL17312 Plasmodium falciparum Reactive Antigens Array 960 University of California Irvine 2013-06-19 Antigen Discovery Inc., Irvine CA Plasmodium falciparum
Plasmodium falciparum
Other spotted peptide or protein, Plasmodium falciparum Reactive Antigens Array, Catalog # 25-MA-0006
6 GPL216 Pf_proteomic 2,417 The Scripps Research Institute 2002-11-08 Plasmodium falciparum 3D7
Plasmodium falciparum 3D7
Other MS, Pf_proteomic, Virtual platform describing proteins identified during analysis of Plasmodium falciparum life cycle. Proteomes analyzed by multidimensional protein identification technology (MudPIT), which combines in-line, high-resolution liquid chromatography and tandem mass spectrometry. Two levels of control were implemented to differentiate parasite from host proteins. By using combined host-parasite sequence databases and noninfected controls, 2,417 parasite proteins were confidently identified out of thousands of host proteins.
7 GPL4569 C. elegans small RNA sequences 89,917 Stanford University 2006-11-17 Caenorhabditis elegans
Caenorhabditis elegans
Other other, C. elegans small RNA sequences, Small RNA sequences from wild type animals fed on sel-1 dsRNA producing bacteria.
8 GPL9814 SAGE:19:MmeI:Apis mellifera 0 2009-12-18 Apis mellifera
Apis mellifera
Other other, SAGE:19:MmeI:Apis mellifera, This is a virtual platform for SAGE libraries generated for Apis mellifera using MmeI as an anchor enzyme.