Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,625)		   Primates
(206)		   Rodents
(12,612)		   Mammals
(782)		   Vertebrates
(1,156)		   Invertebrates
(4,045)		   Plants
(6,642)		   Bacteria
(2,980)		   Viruses
(50)		   Phages
(4)		   Unclassified
(287)		   All
(47,440)		  
  SAGE NlaIII
(19)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(1)		   GeneChip
(503)		   Tiling Array
(1,119)		   cDNA Array
(471)		   Oligo Array
(838)		   Bead Array
(3)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(2)		   HT-Seq
(1,084)		   Other
(5)		   All
(4,045)		  
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 The expression profiles of promastigotes and axenic amastigotes in Leishmania donovani (GSE3835) [SAGE NlaIII] SAGE:10:NlaIII:Leishmania donovani (GPL3252) Shanghai Jiao Tong University 2005-12-14 Leishmania donovani
Leishmania donovani		 29,986
(14,993 x 2) 		1 1 by_platform
by_series
2 Simultaneous gene expression profiling in human macrophages infected with Leishmania major parasites using SAGE (GSE10442) [SAGE NlaIII] SAGE:10:NlaIII:Leishmania major (GPL6471) Institut Pasteur de Tunis 2008-02-07 Leishmania major
Leishmania major		 9,530
(9,530 x 1) 		1 by_platform
by_series
3 SAGE libraries derived from Bombyx ovaries (GSE5830) [SAGE NlaIII] SAGE:16:NlaIII:Bombyx mori (GPL3984) The University of Tokyo 2006-09-13 Bombyx mori
Bombyx mori		 99,802
(49,901 x 2) 		2 by_platform
by_series
4 SAGE in Rhipicephalus (Boophilus) microplus following OP treatment of larvae from OP resistant/susceptible strains. (GSE10109) [SAGE NlaIII] SAGE:10:NlaIII:Rhipicephalus microplus (GPL6351) USDA 2008-01-08 Rhipicephalus microplus
Rhipicephalus microplus		 75,164
(18,791 x 4) 		4 by_platform
by_series
5 Radiation-induced changes in gene expression in the silkworm revealed by serial analysis of gene expression (GSE2689) [SAGE NlaIII] SAGE:10:NlaIII:Bombyx mori (GPL2095) Shanghai Institute of Plant Physiology ang Ecology 2005-05-20 Bombyx mori
Bombyx mori		 63,482
(31,741 x 2) 		2 by_platform
by_series
6 No accelerated rate of protein evolution in male biased Drosophila pseudoobscura genes (GSE2840) [SAGE NlaIII] SAGE:10:NlaIII:Drosophila pseudoobscura (GPL2537) Veterinärmedizinische Universität Wien 2005-06-25 Drosophila pseudoobscura
Drosophila pseudoobscura		 25,008
(12,504 x 2) 		2 by_platform
by_series
7 Nitric oxide-dependent changes in Schistosoma mansoni gene expression (GSE8366) [SAGE NlaIII] SAGE:17:NlaIII:Schistosoma mansoni (GPL5463) Andrew McArthur Consulting 2007-07-03 Schistosoma mansoni
Schistosoma mansoni		 120,870
(60,435 x 2) 		2 by_platform
by_series
8 Induction of a peptide with activity against a broad spectrum of pathogens in the Aedes aegypti salivary gland, following infection with dengue virus (GSE21528) [SAGE NlaIII] SAGE:17:NlaIII:Aedes aegypti (GPL10360) Human Genomic Institut 2010-04-27 Aedes aegypti
Aedes aegypti		 635,424
(317,712 x 2) 		2 by_platform
by_series
9 In vitro generation of human high-density-lipoprotein-resistant Trypanosoma brucei brucei (GSE8369) [SAGE NlaIII] SAGE:17:NlaIII:Trypanosoma brucei brucei (GPL5464) Andrew McArthur Consulting 2007-07-03 Trypanosoma brucei brucei
Trypanosoma brucei brucei		 50,146
(25,073 x 2) 		2 by_platform
by_series
10 Grass shrimp SAGE libraries (GSE4853) [SAGE NlaIII] SAGE:17:NlaIII:Palaemonetes pugio (GPL3770) University of Southern Mississippi 2006-05-16 Palaemonetes pugio
Palaemonetes pugio		 55,016
(13,754 x 4) 		4 by_platform
by_series
11 Gene expression profiling of Schistosoma mansoni larval development using serial analysis of gene expression (SAGE) (GSE9722) [SAGE NlaIII] SAGE:17:NlaIII:Schistosoma mansoni (GPL5463) Andrew McArthur Consulting 2007-11-28 Schistosoma mansoni
Schistosoma mansoni		 302,175
(60,435 x 5) 		5 by_platform
by_series
12 Dictyostelium discoideum amoeba stage library (GSE12095) [SAGE NlaIII] SAGE:10:NlaIII:Dictyostelium discoideum (GPL7037) Idaho State University 2008-07-11 Dictyostelium discoideum
Dictyostelium discoideum		 3,414
(3,414 x 1) 		1 by_platform
by_series
13 Detecting novel low-abundant transcripts in Drosophila (GSE2347) [SAGE NlaIII] SAGE:10:NlaIII:Drosophila melanogaster (GPL1882) ENH Research Institute, Northwestern University 2005-02-28 Drosophila melanogaster
Drosophila melanogaster		 206,125
(41,225 x 5) 		2 3 by_platform
by_series
14 Characterization of the Giardia intestinalis Transcriptome (GSE8336) [SAGE NlaIII] SAGE:11:NlaIII:Giardia intestinalis (GPL5454) Andrew McArthur Consulting 2007-06-29 Giardia intestinalis
Giardia intestinalis		 358,880
(35,888 x 10) 		10 by_platform
by_series
15 C. elegans SAGE (GSE1447) [SAGE NlaIII] SAGE:10:NlaIII:Caenorhabditis elegans (GPL1267) British Columbia Cancer Agency 2004-05-28 Caenorhabditis elegans
Caenorhabditis elegans		 1,444,968
(120,414 x 12) 		1 1 1 9 by_platform
by_series
16 C. elegans SAGE (GSE1447) [SAGE NlaIII] SAGE:17:NlaIII:Caenorhabditis elegans (GPL1268) British Columbia Cancer Agency 2004-05-28 Caenorhabditis elegans
Caenorhabditis elegans		 454,570
(90,914 x 5) 		2 1 1 1 by_platform
by_series
17 Bombyx mori Posterior and Median Silk Gland SAGE transcriptome (GSE23098) [SAGE NlaIII] SAGE:10:NlaIII:Bombyx mori (GPL2095) CNRS-University Lyon 1 2010-07-23 Bombyx mori
Bombyx mori		 63,482
(31,741 x 2) 		2 by_platform
by_series
18 Babesia Infected/Control LongSAGE libraries for Boophilus microplus ovary tissue (GSE9880) [SAGE NlaIII] SAGE:17:NlaIII:Rhipicephalus microplus (GPL6274) USDA 2007-12-13 Rhipicephalus microplus
Rhipicephalus microplus		 16,900
(8,450 x 2) 		2 by_platform
by_series
19 Application of Serial Analysis of Gene Expression to the study of the gene expression profile of Leishmania infantum chagasi promastigote (GSE29369) [SAGE NlaIII] SAGE:17:NlaIII:Leishmania chagasi (GPL11414) INSTITUTO DE DOENÇAS TROPICAIS NATAN PORTELLA 2011-05-18 Leishmania chagasi
Leishmania chagasi		 8,016
(8,016 x 1) 		1 by_platform
by_series
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