Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(67)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(4)
  GeneChip
(7,893)
  Tiling Array
(4,519)
  cDNA Array
(8,269)
  Oligo Array
(16,507)
  Bead Array
(406)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(6)
  HT-Seq
(8,851)
  Other
(9)
  All
(46,584)
 
  brain
(230)
  blood
(90)
  connective
(5)
  reproductive
(225)
  muscular
(15)
  digestive
(58)
  liver
(0)
  lung
(0)
  urinary
(4)
  endo/exo-crine
(23)
  embryo
(395)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(31)
  unclassified
(3,443)
  all
(4,519)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM624679 ZW5.BG3 extraction4_array1 0 Ontario Institute for Cancer Research 2010-11-17 [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) genomic Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:ZW5.BG3 extraction4_array1 channel_1 title:ZW5.BG3 extraction4_array1 description:channel ch1 is input DNA;
2 GSM624678 ZW5.BG3 extraction3_array1 0 Ontario Institute for Cancer Research 2010-11-17 [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) genomic Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:ZW5.BG3 extraction3_array1 channel_1 title:ZW5.BG3 extraction3_array1 description:channel ch1 is ChIP DNA; Antibody information listed below: official name: ZW5;target name: ZW5;host: Rabbit;antigen: GST fusion of aa 5-110 of ZW5 protein;clonal: Polyclonal;purified: Affinity;company: Lab;catalog: Vincent Pirrotta;short description: Rabbit antibody raised against GST fusion protein containing Zeste white 5 sequence.;
3 GSM624677 ZW5.BG3 extraction2_array1 0 Ontario Institute for Cancer Research 2010-11-17 [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) genomic Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:ZW5.BG3 extraction2_array1 channel_1 title:ZW5.BG3 extraction2_array1 description:channel ch1 is input DNA;
4 GSM624676 ZW5.BG3 extraction1_array1 0 Ontario Institute for Cancer Research 2010-11-17 [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) genomic Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:ZW5.BG3 extraction1_array1 channel_1 title:ZW5.BG3 extraction1_array1 description:channel ch1 is ChIP DNA; Antibody information listed below: official name: ZW5;target name: ZW5;host: Rabbit;antigen: GST fusion of aa 5-110 of ZW5 protein;clonal: Polyclonal;purified: Affinity;company: Lab;catalog: Vincent Pirrotta;short description: Rabbit antibody raised against GST fusion protein containing Zeste white 5 sequence.;
5 GSM1096878 ZW5 2-4 hr OR Embryo D.melanogaster Input Rep2 0 Ontario Institute for Cancer Research 2013-03-12 [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) genomic Drosophila melanogaster
Drosophila melanogaster
embryo ZW5 2-4 hr OR Embryo D.melanogaster Input Rep2
6 GSM1096877 ZW5 2-4 hr OR Embryo D.melanogaster Input Rep1 0 Ontario Institute for Cancer Research 2013-03-12 [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) genomic Drosophila melanogaster
Drosophila melanogaster
embryo ZW5 2-4 hr OR Embryo D.melanogaster Input Rep1
7 GSM1096880 ZW5 2-4 hr OR Embryo D.melanogaster ChIP Rep2 0 Ontario Institute for Cancer Research 2013-03-12 [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) genomic Drosophila melanogaster
Drosophila melanogaster
embryo ZW5 2-4 hr OR Embryo D.melanogaster ChIP Rep2
8 GSM1096879 ZW5 2-4 hr OR Embryo D.melanogaster ChIP Rep1 0 Ontario Institute for Cancer Research 2013-03-12 [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) genomic Drosophila melanogaster
Drosophila melanogaster
embryo ZW5 2-4 hr OR Embryo D.melanogaster ChIP Rep1
9 GSM271905 ZicL ChIP-chip on Ciona intestinalis embryo (early gastrula) Sample 2, Array 2 241,700 Kyoto University 2008-03-10 [Tiling Array] Kyoto University Custom Agilent Ciona intestinails 242K Tiling Array No.2 (of 2) (GPL6556) genomic Ciona intestinalis
Ciona intestinalis
intestine Whole Cell Extract (WCE) DNA GFP-tagged ZicL ChIP in Ciona intestinalis embryo (early Gastrula)
10 GSM271904 ZicL ChIP-chip on Ciona intestinalis embryo (early gastrula) Sample 2, Array 1 241,700 Kyoto University 2008-03-10 [Tiling Array] Kyoto University Custom Agilent Ciona intestinails 242K Tiling Array No.1 (of 2) (GPL6555) genomic Ciona intestinalis
Ciona intestinalis
intestine Whole Cell Extract (WCE) DNA GFP-tagged ZicL ChIP in Ciona intestinalis embryo (early Gastrula)
11 GSM271903 ZicL ChIP-chip on Ciona intestinalis embryo (early gastrula) Sample 1, Array 2 241,700 Kyoto University 2008-03-10 [Tiling Array] Kyoto University Custom Agilent Ciona intestinails 242K Tiling Array No.2 (of 2) (GPL6556) genomic Ciona intestinalis
Ciona intestinalis
intestine Whole Cell Extract (WCE) DNA GFP-tagged ZicL ChIP in Ciona intestinalis embryo (early Gastrula)
12 GSM271902 ZicL ChIP-chip on Ciona intestinalis embryo (early gastrula) Sample 1, Array 1 241,700 Kyoto University 2008-03-10 [Tiling Array] Kyoto University Custom Agilent Ciona intestinails 242K Tiling Array No.1 (of 2) (GPL6555) genomic Ciona intestinalis
Ciona intestinalis
intestine Whole Cell Extract (WCE) DNA GFP-tagged ZicL ChIP in Ciona intestinalis embryo (early Gastrula)
13 GSM400372 ZFH1_E-0-12h 0 University of Chicago 2009-05-06 [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) genomic Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:ZFH1_E-0-12h input title:ZFH1_E-0-12h description:ZFH1_E-0-12h test: 84.CEL test: A1_ZFH1.CEL test: B1_ZFH1.CEL reference: B1_Mock.CEL reference: I.CEL reference: S_A1_Mock.CEL
14 GSM897019 Zeus-ChIP 0 MIT 2012-03-16 [Tiling Array] [Dm35b_MF] Affymetrix Drosophila Tiling 1.0F Array (GPL11397) genomic Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:Zeus ChIP Zeus input title:Zeus-ChIP description:Dm2
15 GSM571521 Young Adult reference (mockIP) tiling array extraction3_array1 0 Ontario Institute for Cancer Research 2010-07-28 [Tiling Array] [Ce25b_MR] Affymetrix C. elegans Tiling 1.0R Array (GPL5634) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Young Adult reference (mockIP) tiling array extraction3_array1 channel_1 title:Young Adult reference (mockIP) tiling array extraction3_array1 description:Antibody information listed below: official name: EZview Red ANTI-FLAG® M2 Affinity Gel;target name: FLAG;host: Mouse;antigen: DYKDDDDK;clonal: Monoclonal;purified: Affinity;company: Sigma;catalog: F-2426;reference: http://www.sigmaaldrich.com/catalog/ProductDetail.do?D7=0&N5=Product No.|BRAND KEY&N4=F2426|SIGMA&N25=0&QS=ON&F=SPEC;short description: Binds to the FLAG epitope wherever it is located in the fusion protein: amino-terminal Met-amino-terminal carboxy-terminal or internal. Binding is not Ca2+-dependent.sSuitable for purifying N-terminal Met-N-terminal C-terminal FLAG fusion proteins 3xFLAG fusion proteins.
16 GSM571520 Young Adult reference (mockIP) tiling array extraction2_array1 0 Ontario Institute for Cancer Research 2010-07-28 [Tiling Array] [Ce25b_MR] Affymetrix C. elegans Tiling 1.0R Array (GPL5634) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Young Adult reference (mockIP) tiling array extraction2_array1 channel_1 title:Young Adult reference (mockIP) tiling array extraction2_array1 description:Antibody information listed below: official name: EZview Red ANTI-FLAG® M2 Affinity Gel;target name: FLAG;host: Mouse;antigen: DYKDDDDK;clonal: Monoclonal;purified: Affinity;company: Sigma;catalog: F-2426;reference: http://www.sigmaaldrich.com/catalog/ProductDetail.do?D7=0&N5=Product No.|BRAND KEY&N4=F2426|SIGMA&N25=0&QS=ON&F=SPEC;short description: Binds to the FLAG epitope wherever it is located in the fusion protein: amino-terminal Met-amino-terminal carboxy-terminal or internal. Binding is not Ca2+-dependent.sSuitable for purifying N-terminal Met-N-terminal C-terminal FLAG fusion proteins 3xFLAG fusion proteins.
17 GSM571519 Young Adult reference (mockIP) tiling array extraction1_array1 0 Ontario Institute for Cancer Research 2010-07-28 [Tiling Array] [Ce25b_MR] Affymetrix C. elegans Tiling 1.0R Array (GPL5634) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Young Adult reference (mockIP) tiling array extraction1_array1 channel_1 title:Young Adult reference (mockIP) tiling array extraction1_array1 description:Antibody information listed below: official name: EZview Red ANTI-FLAG® M2 Affinity Gel;target name: FLAG;host: Mouse;antigen: DYKDDDDK;clonal: Monoclonal;purified: Affinity;company: Sigma;catalog: F-2426;reference: http://www.sigmaaldrich.com/catalog/ProductDetail.do?D7=0&N5=Product No.|BRAND KEY&N4=F2426|SIGMA&N25=0&QS=ON&F=SPEC;short description: Binds to the FLAG epitope wherever it is located in the fusion protein: amino-terminal Met-amino-terminal carboxy-terminal or internal. Binding is not Ca2+-dependent.sSuitable for purifying N-terminal Met-N-terminal C-terminal FLAG fusion proteins 3xFLAG fusion proteins.
18 GSM571533 Young Adult Cephalic sheath (CEPsh) tiling array extraction3_array1 0 Ontario Institute for Cancer Research 2010-07-28 [Tiling Array] [Ce25b_MR] Affymetrix C. elegans Tiling 1.0R Array (GPL5634) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Young Adult Cephalic sheath (CEPsh) tiling array extraction3_array1 channel_1 title:Young Adult Cephalic sheath (CEPsh) tiling array extraction3_array1 description:Antibody information listed below: official name: EZview Red ANTI-FLAG® M2 Affinity Gel;target name: FLAG;host: Mouse;antigen: DYKDDDDK;clonal: Monoclonal;purified: Affinity;company: Sigma;catalog: F-2426;reference: http://www.sigmaaldrich.com/catalog/ProductDetail.do?D7=0&N5=Product No.|BRAND KEY&N4=F2426|SIGMA&N25=0&QS=ON&F=SPEC;short description: Binds to the FLAG epitope wherever it is located in the fusion protein: amino-terminal Met-amino-terminal carboxy-terminal or internal. Binding is not Ca2+-dependent.sSuitable for purifying N-terminal Met-N-terminal C-terminal FLAG fusion proteins 3xFLAG fusion proteins.
19 GSM571532 Young Adult Cephalic sheath (CEPsh) tiling array extraction2_array1 0 Ontario Institute for Cancer Research 2010-07-28 [Tiling Array] [Ce25b_MR] Affymetrix C. elegans Tiling 1.0R Array (GPL5634) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Young Adult Cephalic sheath (CEPsh) tiling array extraction2_array1 channel_1 title:Young Adult Cephalic sheath (CEPsh) tiling array extraction2_array1 description:Antibody information listed below: official name: EZview Red ANTI-FLAG® M2 Affinity Gel;target name: FLAG;host: Mouse;antigen: DYKDDDDK;clonal: Monoclonal;purified: Affinity;company: Sigma;catalog: F-2426;reference: http://www.sigmaaldrich.com/catalog/ProductDetail.do?D7=0&N5=Product No.|BRAND KEY&N4=F2426|SIGMA&N25=0&QS=ON&F=SPEC;short description: Binds to the FLAG epitope wherever it is located in the fusion protein: amino-terminal Met-amino-terminal carboxy-terminal or internal. Binding is not Ca2+-dependent.sSuitable for purifying N-terminal Met-N-terminal C-terminal FLAG fusion proteins 3xFLAG fusion proteins.
20 GSM571531 Young Adult Cephalic sheath (CEPsh) tiling array extraction1_array1 0 Ontario Institute for Cancer Research 2010-07-28 [Tiling Array] [Ce25b_MR] Affymetrix C. elegans Tiling 1.0R Array (GPL5634) RNA Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Young Adult Cephalic sheath (CEPsh) tiling array extraction1_array1 channel_1 title:Young Adult Cephalic sheath (CEPsh) tiling array extraction1_array1 description:Antibody information listed below: official name: EZview Red ANTI-FLAG® M2 Affinity Gel;target name: FLAG;host: Mouse;antigen: DYKDDDDK;clonal: Monoclonal;purified: Affinity;company: Sigma;catalog: F-2426;reference: http://www.sigmaaldrich.com/catalog/ProductDetail.do?D7=0&N5=Product No.|BRAND KEY&N4=F2426|SIGMA&N25=0&QS=ON&F=SPEC;short description: Binds to the FLAG epitope wherever it is located in the fusion protein: amino-terminal Met-amino-terminal carboxy-terminal or internal. Binding is not Ca2+-dependent.sSuitable for purifying N-terminal Met-N-terminal C-terminal FLAG fusion proteins 3xFLAG fusion proteins.
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