Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(44)
  Primates
(0)
  Rodents
(15)
  Mammals
(1)
  Vertebrates
(8)
  Invertebrates
(6)
  Plants
(51)
  Bacteria
(7)
  Viruses
(0)
  Phages
(0)
  Unclassified
(6)
  All
(138)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(2)
  Oligo Array
(4)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(6)
 
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL6781 Complete shotgun genomic Leishmania infantum DNA microarrays 30,576 CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS 2008-04-25 CENTRO DE INVESTIGACIONES BIOLÓGICAS-CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS (CIB-CSIC)/CENTRO DE ASTROBIOLOGÍA-INSTITUTO NACIONAL DE TÉCNICA AEROESPACIAL "ESTEBAN TERRADAS"/CSICO Leishmania infantum
Leishmania infantum
cDNA Array spotted DNA/cDNA, Complete shotgun genomic Leishmania infantum DNA microarrays, epoxy
2 GPL17775 Agilent-026862 SexiArray_v1.0 array (Probe Name version) 26,790 University of Valencia 2013-09-26 Agilent Technologies Spodoptera exigua
Spodoptera exigua
Oligo Array in situ oligonucleotide, Agilent-026862 SexiArray_v1.0 array (Probe Name version), Microarray features based on Spodoptera exigua transcriptome sequencing project GAOR00000000.
3 GPL5721 Brems/Hoheisel/Clayton T. brucei genomic array (DKFZ/ZMBH, Heidelberg) 24,576 CSIC 2007-08-07 S. Brems, C. Clayton and J. Hoheisel, DKFZ & ZMBH, Heidelberg, Germany Trypanosoma brucei
Trypanosoma brucei
cDNA Array spotted DNA/cDNA, Brems/Hoheisel/Clayton T. brucei genomic array (DKFZ/ZMBH, Heidelberg),
4 GPL6667 P. vivax exon array v1.0 using oligos designed by Z. Bozdech and G. Hu 22,575 Barcelona Centre for International Health Research 2008-03-31 Agilent Plasmodium vivax
Plasmodium vivax
Oligo Array in situ oligonucleotide, P. vivax exon array v1.0 using oligos designed by Z. Bozdech and G. Hu,
5 GPL3797 01_Drosophila_16K_Universitat_Barcelona 16,416 Universitat de Barcelona 2006-05-23 Departament de Genètica (Universitat de Barcelona) i Plataforma de Transcriptòmica (SCT-PCB-UB) Drosophila melanogaster
Drosophila melanogaster
Oligo Array spotted oligonucleotide, 01_Drosophila_16K_Universitat_Barcelona, Oligonucleotide Drosophila microarray platform containing virtually all genes from the genome. In addition to the Operon Drosophila Genome Oligo Set Version 1.1, a number of positive and negative controls have been printed so that quality of hybridizations and analysis procedures can be assessed.
6 GPL15152 Agilent-023844_Dreissena_IDAEA_15k 15,744 IDAEA-CSIC 2012-01-21 Agilent Dreissena polymorpha
Dreissena polymorpha
Oligo Array in situ oligonucleotide, Agilent-023844_Dreissena_IDAEA_15k, Arrays of this design have barcodes that begin with 16023844 or 2523844. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.