Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(55)		   Primates
(1)		   Rodents
(32)		   Mammals
(8)		   Vertebrates
(10)		   Invertebrates
(18)		   Plants
(42)		   Bacteria
(55)		   Viruses
(2)		   Phages
(1)		   Unclassified
(14)		   All
(239)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(2)		   Tiling Array
(0)		   cDNA Array
(4)		   Oligo Array
(12)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(18)		  
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL16196 NimbleGen C. elegans 12x135K microarrays 33,461 Lab for Conservation and Utilization of Bio-Resources 2012-10-17 NimbleGen Caenorhabditis elegans
Caenorhabditis elegans		 Oligo Array in situ oligonucleotide, NimbleGen C. elegans 12x135K microarrays, NimbleGen 12x135K microarrays for gene expression analysis enable you to conveniently and simultaneously hybridize 12 samples on each slide. 100718_Cele_EXP.ndf 100718_Cele_EXP.ngd
2 GPL14667 Drosophila 2 x 15K Genome Array 32,448 Central China Normal University 2011-10-04 Operon Drosophila melanogaster
Drosophila melanogaster		 Oligo Array spotted oligonucleotide, Drosophila 2 x 15K Genome Array,
3 GPL10763 23K Silkworm Genome Array 24,288 Chinese Academy of Sciences 2010-08-04 CapitalBio Corporation Bombyx mori
Bombyx mori		 Oligo Array spotted oligonucleotide, 23K Silkworm Genome Array,
4 GPL9527 Silkworm 23K oligo array version 2.0 24,288 Institute of Sericulture and System Biology 2009-11-03 CapitalBio and Southwest University Bombyx mori
Bombyx mori		 Oligo Array spotted oligonucleotide, Silkworm 23K oligo array version 2.0,
5 GPL11210 Silkworm 23K oligo array version 2.0 24,283 Southwest University 2010-11-15 CapitalBio and Southwest University Bombyx mori
Bombyx mori		 Oligo Array spotted oligonucleotide, Silkworm 23K oligo array version 2.0,
6 GPL8995 Silkworm Microarray 22k v1 22,987 Southwest University 2009-08-07 Capital bio Bombyx mori
Bombyx mori		 Oligo Array spotted oligonucleotide, Silkworm Microarray 22k v1,
7 GPL14920 Locust 20k 60-mer oligo array 18,308 Institute of Zoology, Chinese Academy of Sciences 2011-11-22 BGI Beijing Locusta migratoria
Locusta migratoria		 Oligo Array spotted oligonucleotide, Locust 20k 60-mer oligo array,
8 GPL10987 Agilent_schistosoma_8x15k_custom 15,744 ShanghaiBio 2010-09-28 Agilent Technologies Schistosoma japonicum
Schistosoma japonicum		 Oligo Array in situ oligonucleotide, Agilent_schistosoma_8x15k_custom,
9 GPL8491 DGRC-Drosophila melanogaster-DGRC1-15552 15k cDNA array_v5 15,552 Sun Yat-Sen University 2009-04-27 Drosophila Genomics Resource Center (DGRC) Drosophila melanogaster
Drosophila melanogaster		 cDNA Array spotted DNA/cDNA, DGRC-Drosophila melanogaster-DGRC1-15552 15k cDNA array_v5,
10 GPL11035 Agilent 020807 Shanghai Institutes for Biological Sciences Bombyx mori 15K array 15,498 Shanghai Institutes for Biological Sciences 2010-10-09 Agilent Bombyx mori
Bombyx mori		 Oligo Array in situ oligonucleotide, Agilent 020807 Shanghai Institutes for Biological Sciences Bombyx mori 15K array, 14623 silkworm candidate genes according to SilkDB were arranged on the Agilent 8*15K two-color chips.
11 GPL16046 C. elegans 12 x 135K Gene Expression Array 15,405 Yunnan University 2012-09-12 NimbleGen Caenorhabditis elegans
Caenorhabditis elegans		 Oligo Array in situ oligonucleotide, C. elegans 12 x 135K Gene Expression Array, NimbleGen 12x135K microarrays for gene expression analysis enable you to conveniently and simultaneously hybridize 12 samples on each slide.
12 GPL3075 Schistosoma japonicum gender-associated differentially expressed gene array 6,272 Shanghai Institute of Domestic Animal Parasitology,Chinese Academy of Agricultural Sciences 2005-11-11 Biostar genechip inc.shanghai Schistosoma japonicum
Schistosoma japonicum		 GeneChip spotted DNA/cDNA, Schistosoma japonicum gender-associated differentially expressed gene array,
13 GPL10471 Mud crab 6K cDNA array version 1.0 5,664 Jimei University 2010-06-01 Functional Genomics and Physiology Research Group, Institute of Aquaculture Biotechnology of Jimei University Scylla paramamosain
Scylla paramamosain		 cDNA Array spotted DNA/cDNA, Mud crab 6K cDNA array version 1.0,
14 GPL7764 Biostar Genechip Moniezia expansa 4k microarray 4,056 The Breed & Biotechnology Key Laboratory of Sheep in XinJiang Bingtuan 2008-12-10 Biostar Genechip Moniezia expansa
Moniezia expansa		 GeneChip spotted DNA/cDNA, Biostar Genechip Moniezia expansa 4k microarray,
15 GPL1944 Schistosoma japonicum 3.1K 3,136 shanghai research institute of domestic animal parasitolgy 2005-04-02 Schistosoma japonicum
Schistosoma japonicum		 cDNA Array spotted DNA/cDNA, Schistosoma japonicum 3.1K, Spotted Schistosoma japonicum differentially expressed gene array on glass.this set includes 3118 gene clone ,2 tubulin control and 16 blank. These gene clone are from subtracted cDNA library. The PCR products of cDNA were amplified by use of the polymerase chain reaction (PCR) and then purified with isopropanol precipitation. All PCR products were examined by agarose gel electrophoresis to ensure the quality and the identity of the amplified clones as expected. Then the amplified PCR products were dissolved in a buffer containing 3X SSC solution. The solution with amplified PCR products were spotted onto silylated slides(Biostar, Shanghai, China) with a Omnigrid Arrayer(Gene Machine,CA) fitted with 16 Major Precision split pins.Glass slides with spotted cDNA was then hydrated for 2 hours in 70% humidity, dried for 0.5 hour at room temperature, UV cross-linked (65mj/cm). They were further processed at room temperature by soaking in 0.2% sodium dodecyl sulfate (SDS) for 10 min, distilled H2O for 10 min, and 0.2% sodium borohydride (NaBH4) for 10 min. The slides were dried again and ready for use.
16 GPL930 the shrimp cDNA array of 3114 clone 3,136 Institute of Oceanology 2004-01-14 Fenneropenaeus chinensis
Fenneropenaeus chinensis		 cDNA Array spotted DNA/cDNA, the shrimp cDNA array of 3114 clone, A total of 3136 cDNA targets including 1578 unique genes from the cDNA library, 1536 cDNA clones from reverse and forward Subtractive Suppression Hybridization (SSH) libraries plus 14 negative and 8 blank control clones were spotted onto the NH2-modified glass slides with an area of 18×18mm. Keywords = Fenneropenaeus chinensis Keywords = WSSV Keywords = microarray Keywords = SSH library Keywords = EST Keywords = cDNA library
17 GPL10677 BPI Silkworm ncRNA Array 132 China-UK-NYNU-RRes Joint Libratory of insect biology 2010-07-13 Beijing Protein Innovation Bombyx mori
Bombyx mori		 Oligo Array spotted oligonucleotide, BPI Silkworm ncRNA Array, Bombyx mori strain Dazao P50
18 GPL9166 CapitalBio Silkworm microRNA _microarray Release 1 106 Southwest University 2009-09-09 CapitalBio, Beijing, China Bombyx mori
Bombyx mori		 Oligo Array spotted oligonucleotide, CapitalBio Silkworm microRNA _microarray Release 1,
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