Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(220)		   Primates
(8)		   Rodents
(273)		   Mammals
(11)		   Vertebrates
(10)		   Invertebrates
(64)		   Plants
(106)		   Bacteria
(52)		   Viruses
(0)		   Phages
(0)		   Unclassified
(6)		   All
(750)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(16)		   Tiling Array
(12)		   cDNA Array
(19)		   Oligo Array
(5)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(12)		   Other
(0)		   All
(64)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 LMN-1-DamID in N2 and set-25(n5021) met-2(n4256) mutant early C. elegans embryos (GSE37226) [Oligo Array] NimbleGen 071121_Celegans180_ChIP03_design_ID_6737 (GPL8134) Friedrich Miescher Institute 2012-04-12 Caenorhabditis elegans
Caenorhabditis elegans		 12,202,878
(2,033,813 x 6) 		6 by_platform
by_series
2 Effects of ploidy and sex-locus genotype on gene expression patterns in the fire ant Solenopsis invicta (GSE42786) [cDNA Array] UNIL_fireant_25K_vE1.0 (GPL6930) University of Lausanne 2012-12-06 Solenopsis invicta
Solenopsis invicta		 2,280,960
(25,344 x 90) 		90 by_platform
by_series
3 Comparison of fire ant adult queens with different supergene genotypes (SB/SB and SB/Sb) and different age classes (1-day-old virgins, 11-day-old virgins and reproductive queens) from 2008 and 2009 (GSE42062) [cDNA Array] UNIL_fireant_25K_vE1.0 (GPL6930) University of Lausanne 2012-11-06 Solenopsis invicta
Solenopsis invicta		 1,976,832
(25,344 x 78) 		78 by_platform
by_series
4 Comparison of fire ant adult workers with different Gp-9 (BB and Bb) genotypes and from monogyne and polygyne colonies. (GSE11694) [cDNA Array] UNIL_fireant_25K_vE1.0 (GPL6930) University of Lausanne 2008-06-05 Solenopsis invicta
Solenopsis invicta		 937,728
(25,344 x 37) 		37 by_platform
by_series
5 Effects of ploidy and sex-locus genotype on gene expression patterns in the fire ant Solenopsis invicta [pupa] (GSE42494) [cDNA Array] UNIL_fireant_25K_vE1.0 (GPL6930) University of Lausanne 2012-11-26 Solenopsis invicta
Solenopsis invicta		 760,320
(25,344 x 30) 		30 by_platform
by_series
6 Effects of ploidy and sex-locus genotype on gene expression patterns in the fire ant Solenopsis invicta [1d] (GSE42779) [cDNA Array] UNIL_fireant_25K_vE1.0 (GPL6930) University of Lausanne 2012-12-06 Solenopsis invicta
Solenopsis invicta		 760,320
(25,344 x 30) 		30 by_platform
by_series
7 Effects of ploidy and sex-locus genotype on gene expression patterns in the fire ant Solenopsis invicta [11d] (GSE42785) [cDNA Array] UNIL_fireant_25K_vE1.0 (GPL6930) University of Lausanne 2012-12-06 Solenopsis invicta
Solenopsis invicta		 760,320
(25,344 x 30) 		30 by_platform
by_series
8 Comparison of fire ant adult workers with different Gp-9 (BB and Bb) genotypes and from monogyne and polygyne colonies. (GSE11694) [cDNA Array] UNIL_fireant_25K_vB1.0 (GPL4401) University of Lausanne 2008-06-05 Solenopsis invicta
Solenopsis invicta		 633,600
(25,344 x 25) 		25 by_platform
by_series
9 Timecourse of gene expression after oprhaning of virgin Solenopsis invicta fire ant queens (GSE19721) [cDNA Array] UNIL_fireant_25K_vE1.0 (GPL6930) University of Lausanne 2010-01-04 Solenopsis invicta
Solenopsis invicta		 608,256
(25,344 x 24) 		16 8 by_platform
by_series
10 RNA immunoprecipitation of GLD-1 followed by microarray analysis of the co-IP'ed mRNAs (GSE21591) [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) Friedrich Miescher Institute 2010-04-29 Caenorhabditis elegans
Caenorhabditis elegans		 339,375
(22,625 x 15) 		15 by_platform
by_series
11 The maternal transcriptome of the crustacean Parhyale hawaiensis is inherited asymmetrically to invariant cell lineages of the ectoderm and mesoderm (GSE41888) [Oligo Array] Agilent-019764 MPI_Gerberding Parhyale hawaiensis Microarray (Feature Number version) (GPL16208) FMI 2012-10-28 Parhyale hawaiensis
Parhyale hawaiensis		 330,624
(15,744 x 21) 		15 6 by_platform
by_series
12 Effect of Spargel on transcriptional changes mediated by the insulin-signalling pathway (GSE14779) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) ETH Zurich 2009-02-10 Drosophila melanogaster
Drosophila melanogaster		 227,424
(18,952 x 12) 		12 by_platform
by_series
13 Gliogenesis in Drosophila (GSE276) [GeneChip] Affymetrix roDROMEGAa Drosophila full genome (GPL70) Institute of Zoology 2003-02-04 Drosophila melanogaster
Drosophila melanogaster		 225,440
(14,090 x 16) 		15 1 by_platform
by_series
14 Heatshock otd / OTX2 (GSE32) [GeneChip] Affymetrix roDROMEGAa Drosophila full genome (GPL70) University of Basel 2002-02-21 Drosophila melanogaster
Drosophila melanogaster		 225,440
(14,090 x 16) 		16 by_platform
by_series
15 Drosophila gliogenesis during early embryogenesis (GSE618) [GeneChip] [DrosGenome1] Affymetrix Drosophila Genome Array (GPL72) Institute of Zoology 2003-09-02 Drosophila melanogaster
Drosophila melanogaster		 224,160
(14,010 x 16) 		8 8 by_platform
by_series
16 Sex-specific role of Drosophila HP1 in regulating chromatin structure and gene transcription (GSE3055) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) FMI 2005-08-04 Drosophila melanogaster
Drosophila melanogaster		 208,472
(18,952 x 11) 		11 by_platform
by_series
17 Developmental Roles of MEC and NuRD Complexes in Caenorhabditis elegans. (GSE21376) [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) University of Fribourg, Zoology 2010-04-18 Caenorhabditis elegans
Caenorhabditis elegans		 203,625
(22,625 x 9) 		9 by_platform
by_series
18 Chromatin structure marks cell-type and gender specific replication of the Drosophila genome (GSE13328) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) FMI 2008-10-23 Drosophila melanogaster
Drosophila melanogaster		 189,520
(18,952 x 10) 		10 by_platform
by_series
19 Heterochromatin protein 1 (HP1) modulates replication timing of Drosophila heterochromatin (GSE18092) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) FMI 2009-09-14 Drosophila melanogaster
Drosophila melanogaster		 189,520
(18,952 x 10) 		10 by_platform
by_series
20 RNA affinity isolation with TAP-Pum and controls (GSE3582) [cDNA Array] dm0603B2 (GPL3058) Swiss Federal Institute of Technology 2005-11-08 Drosophila melanogaster
Drosophila melanogaster		 176,640
(17,664 x 10) 		3 7 by_platform
by_series
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