Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(71)		   Primates
(1)		   Rodents
(53)		   Mammals
(6)		   Vertebrates
(9)		   Invertebrates
(20)		   Plants
(71)		   Bacteria
(29)		   Viruses
(1)		   Phages
(2)		   Unclassified
(1)		   All
(264)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(0)		   Tiling Array
(1)		   cDNA Array
(17)		   Oligo Array
(2)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(20)		  
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL2678 Tiling design for D. melanogaster 390,919 Fred Hutchinson Cancer Research Center 2005-07-27 NimbleGen Systems Inc. Drosophila melanogaster
Drosophila melanogaster		 Tiling Array in situ oligonucleotide, Tiling design for D. melanogaster, All of Chr 4, 2L, pericentric regions on 2, first 2MB on X and part of 2R. Based on FlyBase release 3.2.2. One 60mer per 100 bases.
2 GPL2875 Agilent-012795 C. elegans Oligo Microarray G2518A Option 002 (Feature Number version) 22,575 Agilent Technologies 2005-09-23 Agilent Technologies Caenorhabditis elegans
Caenorhabditis elegans		 Oligo Array in situ oligonucleotide, Agilent-012795 C. elegans Oligo Microarray G2518A Option 002 (Feature Number version), Agilent has made available a new microarray with genome-wide coverage of C. elegans with over 21,000 predicted genes from WormBase, a public C. elegans genome database. Arrays of this design have barcodes that begin with 16012795 or 2512795. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions. *** A different version of this platform with the Agilent Probe names in the ID column is assigned accession number GPL7272.
3 GPL2647 CE_printU 21,888 Stanford Microarray Database (SMD) 2005-07-19 John,,Matese; Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Room 135, Princeton, NJ, United States; (609) 258-8309; jcmatese@genomics.princeton.edu Caenorhabditis elegans
Caenorhabditis elegans		 cDNA Array spotted DNA/cDNA, CE_printU,
4 GPL2646 CE_printK 21,504 Stanford Microarray Database (SMD) 2005-07-19 John,,Matese; Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Room 135, Princeton, NJ, United States; (609) 258-8309; jcmatese@genomics.princeton.edu Caenorhabditis elegans
Caenorhabditis elegans		 cDNA Array spotted DNA/cDNA, CE_printK,
5 GPL2653 CE_printG_H_I 21,504 Stanford Microarray Database (SMD) 2005-07-20 Tina,,Boussard; School of Medicine, Department of Genetics, Stanford, CA, United States, 94305; 650-736-0077; boussard@genome.stanford.edu Caenorhabditis elegans
Caenorhabditis elegans		 cDNA Array spotted DNA/cDNA, CE_printG_H_I,
6 GPL2655 CE_PrintJ 21,504 Stanford Microarray Database (SMD) 2005-07-21 John,,Matese; Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Room 135, Princeton, NJ, United States; (609) 258-8309; jcmatese@genomics.princeton.edu Caenorhabditis elegans
Caenorhabditis elegans		 cDNA Array spotted DNA/cDNA, CE_PrintJ,
7 GPL2754 CE_printL 21,504 Stanford Microarray Database (SMD) 2005-08-12 John,,Matese; Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Room 135, Princeton, NJ, United States; (609) 258-8309; jcmatese@genomics.princeton.edu Caenorhabditis elegans
Caenorhabditis elegans		 cDNA Array spotted DNA/cDNA, CE_printL,
8 GPL2766 CE_printR 21,504 Stanford Microarray Database (SMD) 2005-08-18 John,,Matese; Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Room 135, Princeton, NJ, United States; (609) 258-8309; jcmatese@genomics.princeton.edu Caenorhabditis elegans
Caenorhabditis elegans		 cDNA Array spotted DNA/cDNA, CE_printR,
9 GPL2652 ce_printD 20,736 Stanford Microarray Database (SMD) 2005-07-20 Tina,,Boussard; School of Medicine, Department of Genetics, Stanford, CA, United States, 94305; 650-736-0077; boussard@genome.stanford.edu Caenorhabditis elegans
Caenorhabditis elegans		 cDNA Array spotted DNA/cDNA, ce_printD,
10 GPL2632 TGD 14,592 Stanford Microarray Database (SMD) 2005-07-15 Janos,,Demeter; Dept. Genetics, CCSR 2255, Stanford, CA, USA, 94305; 726-0075; jdemeter@genome.stanford.edu Toxoplasma gondii
Toxoplasma gondii		 cDNA Array spotted DNA/cDNA, TGD,
11 GPL2662 EHD_FINAL 11,520 Stanford Microarray Database (SMD) 2005-07-21 Stanford Entamoeba histolytica
Entamoeba histolytica		 cDNA Array spotted DNA/cDNA, EHD_FINAL,
12 GPL2840 DM-07_2000-25col 9,600 Stanford Microarray Database (SMD) 2005-09-09 John,,Matese; Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Room 135, Princeton, NJ, United States; (609) 258-8309; jcmatese@genomics.princeton.edu Drosophila melanogaster
Drosophila melanogaster		 cDNA Array spotted DNA/cDNA, DM-07_2000-25col,
13 GPL2837 DM-03_00_2000 9,216 Stanford Microarray Database (SMD) 2005-09-09 John,,Matese; Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Room 135, Princeton, NJ, United States; (609) 258-8309; jcmatese@genomics.princeton.edu Drosophila melanogaster
Drosophila melanogaster		 cDNA Array spotted DNA/cDNA, DM-03_00_2000,
14 GPL2838 DM-07_02_2000 9,216 Stanford Microarray Database (SMD) 2005-09-09 John,,Matese; Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Room 135, Princeton, NJ, United States; (609) 258-8309; jcmatese@genomics.princeton.edu Drosophila melanogaster
Drosophila melanogaster		 cDNA Array spotted DNA/cDNA, DM-07_02_2000,
15 GPL2839 DM-11_00_2000 9,216 Stanford Microarray Database (SMD) 2005-09-09 John,,Matese; Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Room 135, Princeton, NJ, United States; (609) 258-8309; jcmatese@genomics.princeton.edu Drosophila melanogaster
Drosophila melanogaster		 cDNA Array spotted DNA/cDNA, DM-11_00_2000,
16 GPL2752 TGC 5,376 Stanford Microarray Database (SMD) 2005-08-12 John,,Matese; Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Room 135, Princeton, NJ, United States; (609) 258-8309; jcmatese@genomics.princeton.edu Toxoplasma gondii
Toxoplasma gondii		 cDNA Array spotted DNA/cDNA, TGC,
17 GPL2753 TGB 4,992 Stanford Microarray Database (SMD) 2005-08-12 John,,Matese; Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Room 135, Princeton, NJ, United States; (609) 258-8309; jcmatese@genomics.princeton.edu Toxoplasma gondii
Toxoplasma gondii		 cDNA Array spotted DNA/cDNA, TGB,
18 GPL2751 ToxoGondii_1 4,224 Stanford Microarray Database (SMD) 2005-08-12 Tina,,Boussard; School of Medicine, Department of Genetics, Stanford, CA, United States, 94305; 650-736-0077; boussard@genome.stanford.edu Toxoplasma gondii
Toxoplasma gondii		 cDNA Array spotted DNA/cDNA, ToxoGondii_1,
19 GPL2661 EHC 3,072 Stanford Microarray Database (SMD) 2005-07-21 Catherine,,Ball; Stanford University School of Medicine, Department of Genetics, CCSR Room 2255b, Stanford, CA, USA, 94305; 650-498-6012; ball@genome.stanford.edu Entamoeba histolytica
Entamoeba histolytica		 cDNA Array spotted DNA/cDNA, EHC,
20 GPL2888 DaphniaArray 178 National Institutes of Natural Sciences 2005-09-26 Development of Daphnia magna DNA microarray for the evaluation of toxicity in environmental chemicals Daphnia magna
Daphnia magna		 Oligo Array spotted oligonucleotide, DaphniaArray,
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