Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(545)		   Primates
(8)		   Rodents
(358)		   Mammals
(33)		   Vertebrates
(31)		   Invertebrates
(73)		   Plants
(201)		   Bacteria
(116)		   Viruses
(0)		   Phages
(0)		   Unclassified
(9)		   All
(1,376)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(13)		   Tiling Array
(11)		   cDNA Array
(20)		   Oligo Array
(18)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(11)		   Other
(0)		   All
(73)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Genome-wide profiling of salt fractions maps physical properties of chromatin (GSE13217) [Tiling Array] Henikoff_Dmel_r52_ChIP tiling design (GPL6888) Fred Hutchinson Cancer Research Center 2008-10-15 Drosophila melanogaster
Drosophila melanogaster		 97,981,012
(2,130,022 x 46) 		46 by_platform
by_series
2 High-resolution array comparative genomic hybridization of genetic deficiencies on chromosome V in C. elegans (GSE14036) [Oligo Array] Array designs: Whole Genome (GPL4553) University of British Columbia 2008-12-18 Caenorhabditis elegans
Caenorhabditis elegans		 7,769,360
(388,468 x 20) 		20 by_platform
by_series
3 Leishmania major promastigote ChIP-chip: TBP, SNAP50, acetylH3 (GSE13415) [Tiling Array] Leishmania major Friedlin v5.1 Forward Tiling Microarray (GPL7545) University of Washington 2008-10-31 Leishmania major
Leishmania major		 4,713,336
(392,778 x 12) 		12 by_platform
by_series
4 Defining Behavioral and Molecular Differences Between Summer and Migratory Monarch Butterflies (GSE14041) [Oligo Array] Umass/Reppert Danaus plexippus EST custom Nimblegen array (GPL7829) University of Massachusetts Medical School 2008-12-18 Danaus plexippus
Danaus plexippus		 2,631,520
(65,788 x 40) 		40 by_platform
by_series
5 Colonization, luminescence, and autoinducer effects on host transcription during development of squid-vibrio association (GSE13533) [cDNA Array] UI Squid EST 30K cDNA array (GPL3825) The University of Iowa 2008-11-08 Euprymna scolopes
Euprymna scolopes		 1,350,000
(30,000 x 45) 		45 by_platform
by_series
6 Transcriptional profiles of adult Schistosoma japonicum in response to insulin (GSE13891) [Oligo Array] Agilent-016061 QIMR Schistosoma 44k v 1.0 (GPL7160) Queensland Institute of Medical Reaseach 2008-12-09 Schistosoma japonicum
Schistosoma japonicum		 1,266,160
(45,220 x 28) 		28 by_platform
by_series
7 Drosophila melanogaster developmental timecourse: wild type, eve, ftz (GSE14086) [cDNA Array] Dmel_arrayplatform (GPL248) University of Chicago 2008-12-22 Drosophila melanogaster
Drosophila melanogaster		 1,260,000
(20,000 x 63) 		63 by_platform
by_series
8 ChIP-chip analysis of NFI-1 in wildtype (N2) mixed stage C. elegans (GSE13918) [Tiling Array] UNC_Lieb_Agilent_Celegans_185K (GPL7776) University of North Carolina-Chapel Hill 2008-12-11 Caenorhabditis elegans
Caenorhabditis elegans		 1,084,518
(180,753 x 6) 		6 by_platform
by_series
9 Taura Syndrome Virus or Yellow Head Virus infection in two strains of L. vannamei different in their resistance to TSV (GSE13354) [cDNA Array] HML L. vannamei 15k cDNA array v1.1 (GPL7532) Medical University South Carolina 2008-10-27 Litopenaeus vannamei
Litopenaeus vannamei		 913,920
(13,056 x 70) 		70 by_platform
by_series
10 Drosophila melanogaster transcriptional profiling over life span: Indy vs. Controls (GSE13872) [cDNA Array] Dmel_arrayplatform (GPL248) Brown University 2008-12-08 Drosophila melanogaster
Drosophila melanogaster		 840,000
(20,000 x 42) 		42 by_platform
by_series
11 Genome-wide analysis of alternative pre-mRNA splicing of the Drosophila hnRNP A/B family members (GSE13940) [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) Stowers Institute for Medical Research 2008-12-13 Drosophila melanogaster
Drosophila melanogaster		 672,544
(42,034 x 16) 		16 by_platform
by_series
12 Splicing_Arrays_1 (GSE13943) [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) Stowers Institute for Medical Research 2008-12-14 Drosophila melanogaster
Drosophila melanogaster		 504,408
(42,034 x 12) 		12 by_platform
by_series
13 Molecular analysis of photic inhibition of blood-feeding in Anopheles gambiae (GSE13560) [Oligo Array] Anopheles gambiae genome array design for Zeitgeber project (GPL7565) Johns Hopkins School of Public Health 2008-11-11 Anopheles gambiae
Anopheles gambiae		 495,816
(20,659 x 24) 		12 6 6 by_platform
by_series
14 MyoD ChIP-chip on Ciona intestinalis embryo (early-mid gastrula) (GSE13012) [Tiling Array] Kyoto University Custom Agilent Ciona intestinails 242K Tiling Array No.1 (of 2) (GPL6555) Kyoto University 2008-10-02 Ciona intestinalis
Ciona intestinalis		 483,400
(241,700 x 2) 		2 by_platform
by_series
15 MyoD ChIP-chip on Ciona intestinalis embryo (early-mid gastrula) (GSE13012) [Tiling Array] Kyoto University Custom Agilent Ciona intestinails 242K Tiling Array No.2 (of 2) (GPL6556) Kyoto University 2008-10-02 Ciona intestinalis
Ciona intestinalis		 483,400
(241,700 x 2) 		2 by_platform
by_series
16 Nutritional control of gene expression during C. elegans L1 arrest and recovery (GSE14009) [GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200) Duke University 2008-12-17 Caenorhabditis elegans
Caenorhabditis elegans		 407,250
(22,625 x 18) 		1 17 by_platform
by_series
17 D. simulans vs. Sechellia adult heads choice vs. no choice -DGRC Two Colour arrays with Dye Swapping (GSE13778) [cDNA Array] DGRC-D. melanogaster-DGRC1-15552-v4 (GPL3829) Michigan State University 2008-12-01 Drosophila sechellia
Drosophila sechellia		 373,248
(15,552 x 24) 		24 by_platform
by_series
18 Genomic consequences of background effects on scalloped mutant expressivity in the wing of Drosophila (GSE13779) [cDNA Array] DGRC-D. melanogaster-DGRC1-15552-v5 (GPL3830) Michigan State University 2008-12-01 Drosophila melanogaster
Drosophila melanogaster		 373,248
(15,552 x 24) 		24 by_platform
by_series
19 Gene expression profiling in Daphnia magna, Part III: Uncovering Biomarkers for Metal and ORC exposures (GSE13169) [cDNA Array] Daphnia magna cDNA microarray ver. 2 (GPL5129) UMass Boston 2008-10-13 Daphnia magna
Daphnia magna		 360,960
(7,680 x 47) 		47 by_platform
by_series
20 Gene Expression during the Egg Development of Drosophila melanogaster. (GSE13303) [Oligo Array] FL002 - INDAC Drosophila melanogaster 14.5K long oligo array (GPL5016) University of Cambridge 2008-10-22 Drosophila melanogaster
Drosophila melanogaster		 347,664
(14,486 x 24) 		24 by_platform
by_series
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