Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(808)		   Primates
(6)		   Rodents
(475)		   Mammals
(45)		   Vertebrates
(47)		   Invertebrates
(302)		   Plants
(266)		   Bacteria
(116)		   Viruses
(1)		   Phages
(0)		   Unclassified
(8)		   All
(2,076)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(23)		   Tiling Array
(102)		   cDNA Array
(8)		   Oligo Array
(69)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(100)		   Other
(0)		   All
(302)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Broad chromosomal domains of histone modification patterns in C. elegans (GSE26186) [Tiling Array] 080922_modEncode_Caenorhabditis elegans_2M tiling chip_HX1 (GPL8647) Ontario Institute for Cancer Research 2010-12-20 Caenorhabditis elegans
Caenorhabditis elegans		 160,650,000
(2,142,000 x 75) 		10 1 64 by_platform
by_series
2 An MLL/COMPASS subunit functions in the C. elegans dosage compensation complex to target X chromosomes for transcriptional regulation of gene expression (GSE25834) [Oligo Array] NimbleGen 071121_Celegans180_ChIP03_design_ID_6737 (GPL8134) HHMI/UCB 2010-12-03 Caenorhabditis elegans
Caenorhabditis elegans		 95,589,211
(2,033,813 x 47) 		45 2 by_platform
by_series
3 Examination of DPY-30, DPY-27, SDC-3, DPY-26, MIX-1, SMC-4, ASH-2, RNA Polymerase II binding in wild type and DCC mutant embryos (GSE25833) [Oligo Array] NimbleGen 071121_Celegans180_ChIP03_design_ID_6737 (GPL8134) HHMI/UCB 2010-12-03 Caenorhabditis elegans
Caenorhabditis elegans		 89,487,772
(2,033,813 x 44) 		44 by_platform
by_series
4 Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2 (GSE25933) [Tiling Array] 080922_modEncode_Caenorhabditis elegans_2M tiling chip_HX1 (GPL8647) Ontario Institute for Cancer Research 2010-12-08 Caenorhabditis elegans
Caenorhabditis elegans		 42,840,000
(2,142,000 x 20) 		20 by_platform
by_series
5 Broad chromosomal domains of histone modification patterns in C. elegans (GSE26186) [Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685) Ontario Institute for Cancer Research 2010-12-20 Caenorhabditis elegans
Caenorhabditis elegans		 23,676,900
(1,973,075 x 12) 		1 6 5 by_platform
by_series
6 The Ecoresponsive Genome of Daphnia pulex: Empirical annotation of the Daphnia pulex genome (GSE25823) [Tiling Array] NimbleGen Daphnia pulex Whole-genome Tiling Array Set (2 of 2) (GPL11201) Indiana University 2010-12-02 Daphnia pulex
Daphnia pulex		 18,548,109
(2,060,901 x 9) 		9 by_platform
by_series
7 The Ecoresponsive Genome of Daphnia pulex: Empirical annotation of the Daphnia pulex genome (GSE25823) [Tiling Array] NimbleGen Daphnia pulex Whole-genome Tiling Array Set (1 of 2) (GPL11200) Indiana University 2010-12-02 Daphnia pulex
Daphnia pulex		 18,548,082
(2,060,898 x 9) 		9 by_platform
by_series
8 The Ecoresponsive Genome of Daphnia pulex: Empirical annotation of the Daphnia pulex genome (GSE25823) [Oligo Array] NimbleGen Daphnia pulex Expression Array 12x135k (All Probes) (GPL11278) Indiana University 2010-12-02 Daphnia pulex
Daphnia pulex		 8,880,828
(134,558 x 66) 		4 62 by_platform
by_series
9 Trancriptome analysis of honey bees (Apis mellifera) infected with Nosema ceranae (GSE25455) [Tiling Array] NimbleGen Apis mellifera 4.0 Whole-genome CGH Tiling Array Set (1 of 4) (GPL11147) Indiana University 2010-11-17 Apis mellifera
Apis mellifera		 6,500,010
(2,166,670 x 3) 		3 by_platform
by_series
10 Trancriptome analysis of honey bees (Apis mellifera) infected with Nosema ceranae (GSE25455) [Tiling Array] NimbleGen Apis mellifera 4.0 Whole-genome CGH Tiling Array Set (2 of 4) (GPL11148) Indiana University 2010-11-17 Apis mellifera
Apis mellifera		 6,500,007
(2,166,669 x 3) 		3 by_platform
by_series
11 Trancriptome analysis of honey bees (Apis mellifera) infected with Nosema ceranae (GSE25455) [Tiling Array] NimbleGen Apis mellifera 4.0 Whole-genome CGH Tiling Array Set (3 of 4) (GPL11149) Indiana University 2010-11-17 Apis mellifera
Apis mellifera		 6,500,007
(2,166,669 x 3) 		3 by_platform
by_series
12 Trancriptome analysis of honey bees (Apis mellifera) infected with Nosema ceranae (GSE25455) [Tiling Array] NimbleGen Apis mellifera 4.0 Whole-genome CGH Tiling Array Set (4 of 4) (GPL11150) Indiana University 2010-11-17 Apis mellifera
Apis mellifera		 6,500,007
(2,166,669 x 3) 		3 by_platform
by_series
13 Evolutionary Diversification of Duplicated Genes; Experiments B-I, M-P (GSE25843) [Oligo Array] NimbleGen Daphnia pulex Expression Array 12x135k (All Probes) (GPL11278) Indiana University 2010-12-03 Daphnia pulex
Daphnia pulex		 6,458,784
(134,558 x 48) 		48 by_platform
by_series
14 Fly_embryos_1-3_hr_150_mM_Salt_Extracted_Chromatin (GSE25375) [Tiling Array] Henikoff_Dmel_r52_ChIP tiling design (GPL6888) Ontario Institute for Cancer Research 2010-11-15 Drosophila melanogaster
Drosophila melanogaster		 6,390,066
(2,130,022 x 3) 		3 by_platform
by_series
15 Fly_embryos_4-6_hr_600_mM_Salt_Extracted_Chromatin_Pellet (GSE25380) [Tiling Array] Henikoff_Dmel_r52_ChIP tiling design (GPL6888) Ontario Institute for Cancer Research 2010-11-15 Drosophila melanogaster
Drosophila melanogaster		 6,390,066
(2,130,022 x 3) 		3 by_platform
by_series
16 S2_RNA_expression_Tiling_Array (GSE25392) [Tiling Array] Henikoff_Dmel_r52_ChIP tiling design (GPL6888) Ontario Institute for Cancer Research 2010-11-15 Drosophila melanogaster
Drosophila melanogaster		 6,390,066
(2,130,022 x 3) 		3 by_platform
by_series
17 Empirical Annotation of the Daphnia pulex genome; Experiment B (GSE25852) [Tiling Array] NimbleGen Daphnia pulex Whole-genome Tiling Array Set (2 of 2) (GPL11201) Indiana University 2010-12-04 Daphnia pulex
Daphnia pulex		 6,182,703
(2,060,901 x 3) 		3 by_platform
by_series
18 Empirical Annotation of the Daphnia pulex genome; Experiment A (GSE25855) [Tiling Array] NimbleGen Daphnia pulex Whole-genome Tiling Array Set (2 of 2) (GPL11201) Indiana University 2010-12-05 Daphnia pulex
Daphnia pulex		 6,182,703
(2,060,901 x 3) 		3 by_platform
by_series
19 Empirical Annotation of the Daphnia pulex genome; Experiment C (GSE25856) [Tiling Array] NimbleGen Daphnia pulex Whole-genome Tiling Array Set (2 of 2) (GPL11201) Indiana University 2010-12-05 Daphnia pulex
Daphnia pulex		 6,182,703
(2,060,901 x 3) 		3 by_platform
by_series
20 Empirical Annotation of the Daphnia pulex genome; Experiment B (GSE25852) [Tiling Array] NimbleGen Daphnia pulex Whole-genome Tiling Array Set (1 of 2) (GPL11200) Indiana University 2010-12-04 Daphnia pulex
Daphnia pulex		 6,182,694
(2,060,898 x 3) 		3 by_platform
by_series
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