Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Invertebrates
(1,004)

Plants
(2,170)

Bacteria
(1,636)

SAGE RsaI
(0)

SAGE Sau3A
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(1)

HT-Seq
(240)

Other
(6)

All
(1,004)

1 | 2 | 3 | 4 | 5 » [51]

	Platform ID	Title	Number of the probes	Institute	Submission date	Manufacturer	Species	Platform class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GPL3797	01_Drosophila_16K_Universitat_Barcelona	16,416	Universitat de Barcelona	2006-05-23	Departament de GenÃƒÂ¨tica (Universitat de Barcelona) i Plataforma de TranscriptÃƒÂ²mica (SCT-PCB-UB)	Drosophila melanogaster	Oligo Array	spotted oligonucleotide, 01_Drosophila_16K_Universitat_Barcelona, Oligonucleotide Drosophila microarray platform containing virtually all genes from the genome. In addition to the Operon Drosophila Genome Oligo Set Version 1.1, a number of positive and negative controls have been printed so that quality of hybridizations and analysis procedures can be assessed.
2	GPL8647	080922_modEncode_Caenorhabditis elegans_2M tiling chip_HX1	2,142,000	UNC	2009-06-04	Nimblegen Systems Inc	Caenorhabditis elegans	Tiling Array	in situ oligonucleotide, 080922_modEncode_Caenorhabditis elegans_2M tiling chip_HX1, Native NimbleGen files (ndf, pos) are linked below as supplementary files.
3	GPL9290	2005-09-13_Dros_300bp_60mer	377,566	University of Cambridge	2009-09-24	NimbleGen	Drosophila melanogaster	Oligo Array	in situ oligonucleotide, 2005-09-13_Dros_300bp_60mer, Release 4 genome from the Berkeley Drosophila Genome Project (BDGP). 60-bp probes at approximately 300 bp intervals, preferably no GATC sequences, CG content as close to 50% as possible, non-repetitive.
4	GPL10867	2007-03-13_Henikoff_Dros_ChIP_1	384,767	Institute of Human Genetics	2010-08-31	NimbleGen	Drosophila melanogaster	Tiling Array	in situ oligonucleotide, 2007-03-13_Henikoff_Dros_ChIP_1, Tiling array mapping euchromatic regions of the Drosophila melanogaster genome (Flybase release 4). Chip 1 of 3 of a NimbleGen platform (DesignID=5385) originally designed by Henikoff and Mito (GEO accession: GPL3352). Whole chromosome 3R mapped with 219005 isothermal probes with an average oligonucleotide length of 50bp and an average inter-oligo spacing of 120bp. The 3R chromosome sequence was unchanged from FlyBase release 4 to FlyBase release 5 and thus release 4 coordinates also corresponds to release 5 coordinates for this chromosome. Other probes provide dense tiling of Chr 2L proximal, Chr X proximal and distal, first part of Chr 4, and Bithorax complex (BXC1).
5	GPL7743	2007-05-17_C_elegans_ChIP_01	657,691	UNC	2008-12-05	Nimblegen Systems Inc	Caenorhabditis elegans	Oligo Array	in situ oligonucleotide, 2007-05-17_C_elegans_ChIP_01, Singh-Gasson S, Green RD, Yue Y, Nelson C, Blattner F, Sussman MR,Cerrina F. Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array. Nat Biotechnol. 1999 Oct;17(10):974-8. PMID: 10504697
6	GPL7744	2007-05-17_C_elegans_ChIP_02	657,692	UNC	2008-12-05	Nimblegen Systems Inc	Caenorhabditis elegans	Oligo Array	in situ oligonucleotide, 2007-05-17_C_elegans_ChIP_02,
7	GPL7745	2007-05-17_C_elegans_ChIP_03	657,692	UNC	2008-12-05	Nimblegen Systems Inc	Caenorhabditis elegans	Oligo Array	in situ oligonucleotide, 2007-05-17_C_elegans_ChIP_03, Singh-Gasson S, Green RD, Yue Y, Nelson C, Blattner F, Sussman MR,Cerrina F. Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array. Nat Biotechnol. 1999 Oct;17(10):974-8. PMID: 10504697
8	GPL10763	23K Silkworm Genome Array	24,288	Chinese Academy of Sciences	2010-08-04	CapitalBio Corporation	Bombyx mori	Oligo Array	spotted oligonucleotide, 23K Silkworm Genome Array,
9	GPL11014	454 GS (Caenorhabditis elegans)	0		2010-10-04		Caenorhabditis elegans	HT Sequencing	high-throughput sequencing, 454 GS (Caenorhabditis elegans),
10	GPL13991	454 GS (Cimex lectularius)	0		2011-07-28		Cimex lectularius	HT Sequencing	high-throughput sequencing, 454 GS (Cimex lectularius),
11	GPL10876	454 GS (Drosophila melanogaster)	0		2010-09-02		Drosophila melanogaster	HT Sequencing	high-throughput sequencing, 454 GS (Drosophila melanogaster),
12	GPL9772	454 GS 20 (Drosophila melanogaster)	0		2009-12-09		Drosophila melanogaster	HT Sequencing	high-throughput sequencing, 454 GS 20 (Drosophila melanogaster),
13	GPL9773	454 GS 20 (Drosophila pseudoobscura)	0		2009-12-09		Drosophila pseudoobscura	HT Sequencing	high-throughput sequencing, 454 GS 20 (Drosophila pseudoobscura),
14	GPL9085	454 GS FLX (Caenorhabditis elegans)	0		2009-08-24		Caenorhabditis elegans	HT Sequencing	high-throughput sequencing, 454 GS FLX (Caenorhabditis elegans),
15	GPL9333	454 GS FLX (Drosophila melanogaster)	0		2009-10-01		Drosophila melanogaster	HT Sequencing	high-throughput sequencing, 454 GS FLX (Drosophila melanogaster),
16	GPL16534	454 GS FLX (Entamoeba histolytica)	0		2013-01-22		Entamoeba histolytica	HT Sequencing	high-throughput sequencing, 454 GS FLX (Entamoeba histolytica),
17	GPL15903	454 GS FLX (Litopenaeus stylirostris)	0		2012-08-08		Litopenaeus stylirostris	HT Sequencing	high-throughput sequencing, 454 GS FLX (Litopenaeus stylirostris),
18	GPL9326	454 GS FLX (Schmidtea mediterranea)	0		2009-09-30		Schmidtea mediterranea	HT Sequencing	high-throughput sequencing, 454 GS FLX (Schmidtea mediterranea),
19	GPL14832	454 GS FLX Titanium (Caenorhabditis elegans)	0		2011-11-03		Caenorhabditis elegans	HT Sequencing	high-throughput sequencing, 454 GS FLX Titanium (Caenorhabditis elegans),
20	GPL15185	A-UMCU-CE44K-1.0	45,220	UMC Utrecht	2012-02-03	Holstege Lab, UMC Utrecht, The Netherlands	Caenorhabditis elegans	Oligo Array	in situ oligonucleotide, A-UMCU-CE44K-1.0,

1 | 2 | 3 | 4 | 5 » [51]