Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(19)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(1)		   GeneChip
(482)		   Tiling Array
(1,098)		   cDNA Array
(469)		   Oligo Array
(816)		   Bead Array
(3)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(2)		   HT-Seq
(901)		   Other
(5)		   All
(3,796)		  
1   |   2   |   3   |   4   |   5      »      [190]
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Termination of diapause in response to long days in Wyeomyia smithii (GSE18848) [cDNA Array] Wyeomyia smithii cDNA microarray (U of Oregon) (GPL9498) University of Oregon 2009-11-02 Wyeomyia smithii
Wyeomyia smithii		 460,800
(19,200 x 24) 		24 by_platform
by_series
2 Toxicogenomic analyses of Ruditapes philippinarum by DNA microarray: new tools for anthropogenic impact assessment on the Venice Lagoon. (GSE26985) [Oligo Array] UniversityPadova_Ruditapes philippinarum_4x44K_v1.0 (GPL10900) University of Padova 2011-01-31 Venerupis philippinarum
Venerupis philippinarum		 2,725,632
(42,588 x 64) 		64 by_platform
by_series
3 Comparison of gene expression profile of Ruditapes philippinarum sampled in Marghera and Alberoni (GSE27194) [Oligo Array] UniversityPadova_Ruditapes philippinarum_4x44K_v1.0 (GPL10900) University of Padova 2011-02-09 Venerupis philippinarum
Venerupis philippinarum		 511,056
(42,588 x 12) 		6 6 by_platform
by_series
4 Comparison of gene expression profile of Ruditapes philippinarum gills and digestive glands. (GSE24101) [Oligo Array] UniversityPadova_Ruditapes philippinarum_4x44K_v1.0 (GPL10900) University of Padova 2010-09-13 Venerupis philippinarum
Venerupis philippinarum		 255,528
(42,588 x 6) 		3 3 by_platform
by_series
5 Biological replicates of Ruditapes philippinarum digestive gland pools (GSE24050) [Oligo Array] UniversityPadova_Ruditapes philippinarum_4x44K_v1.0 (GPL10900) University of Padova 2010-09-09 Venerupis philippinarum
Venerupis philippinarum		 170,352
(42,588 x 4) 		4 by_platform
by_series
6 Microarray development for the Grooved carpet shell clam, Ruditapes decussatus: Functional approach to host parasite interaction (GSE36276) [Oligo Array] Agilent-028465/UniversityPadova Ruditapes decussatus 4x44K v1.0 (Feature Number version) (GPL15303) University of Padova 2012-03-05 Venerupis decussatus
Venerupis decussatus		 361,400
(45,175 x 8) 		8 by_platform
by_series
7 [E-MTAB-475] Trypanosoma vivax Y486 bloodstream stage RNAseq (GSE30609) [HT Sequencing] Illumina Genome Analyzer II (Trypanosoma vivax) (GPL13893) European Bioinformatics Institute 2011-07-12 Trypanosoma vivax
Trypanosoma vivax		 1
(0 x 1) 		1 by_platform
by_series
8 Widespread, focal copy number variations (CNV) in Trypanosoma cruzi strains (GSE23576) [Oligo Array] Nimblegen T. cruzi 290K version 1.0 (GPL10781) University of Georgia 2010-08-11 Trypanosoma cruzi
Trypanosoma cruzi		 560,160
(35,010 x 16) 		16 by_platform
by_series
9 Epigenetic regulation of transcription and virulence of Trypanosoma cruzi (GSE23855) [Oligo Array] PFGRC Trypanosoma cruzi Oligonucleotide Array v2 (GPL10386) University of Georgia 2010-08-27 Trypanosoma cruzi
Trypanosoma cruzi		 158,976
(26,496 x 6) 		6 by_platform
by_series
10 Comparison of Trypanosoma cruzi strains from patients with indeterminate and cardiac forms of Chagas disease (GSE1828) [cDNA Array] cDNA microarray Trymanosoma cruzi - v.2 (GPL1484) Universidade de São Paulo 2004-10-08 Trypanosoma cruzi
Trypanosoma cruzi		 107,520
(3,840 x 28) 		26 2 by_platform
by_series
11 Transcriptome analysis of the Trypanosoma cruzi life-cycle (GSE14641) [Oligo Array] PFGRC Trypanosoma cruzi Oligonucleotide Array v1 (GPL8132) University of Georgia 2009-01-29 Trypanosoma cruzi
Trypanosoma cruzi		 105,984
(26,496 x 4) 		4 by_platform
by_series
12 Trypanosoma cruzi gene expression study in response to gamma-radiation (GSE29510) [Oligo Array] JCVI PFGRC Trypanosoma cruzi 26K v2 array designed primarily based on strain CL Brener (GPL5906) Universidade Federal de Minas Gerais 2011-05-24 Trypanosoma cruzi
Trypanosoma cruzi		 63,940
(12,788 x 5) 		5 by_platform
by_series
13 Epigenetic regulation of transcription and virulence in Trypanosoma cruzi by O-linked thymine glucosylation of DNA (GSE26754) [HT Sequencing] Illumina Genome Analyzer II (Trypanosoma cruzi) (GPL11626) University of Bern 2011-01-20 Trypanosoma cruzi
Trypanosoma cruzi		 8
(0 x 8) 		8 by_platform
by_series
14 Widespread variation in transcript abundance within and across developmental stages of Trypanosoma brucei (GSE18049) [Tiling Array] Trypanosoma brucei Strain 927 Oligonucleotide Tiling Array (GPL9285) Seattle Biomedical Research Institute 2009-09-09 Trypanosoma brucei TREU927
Trypanosoma brucei TREU927		 121,890
(8,126 x 15) 		15 by_platform
by_series
15 Transcriptome analysis of two life cycle stages of Trypanosoma brucei gambiense (GSE18065) [HT Sequencing] Illumina Genome Analyzer II (Trypanosoma brucei gambiense) (GPL9247) University of Glasgow 2009-09-10 Trypanosoma brucei gambiense
Trypanosoma brucei gambiense		 6
(0 x 6) 		3 3 by_platform
by_series
16 In vitro generation of human high-density-lipoprotein-resistant Trypanosoma brucei brucei (GSE8369) [SAGE NlaIII] SAGE:17:NlaIII:Trypanosoma brucei brucei (GPL5464) Andrew McArthur Consulting 2007-07-03 Trypanosoma brucei brucei
Trypanosoma brucei brucei		 50,146
(25,073 x 2) 		2 by_platform
by_series
17 Transcriptome analysis of Cymelarsan resistant and Cymelarsan sensitive strains of Trypanosoma brucei. (GSE23288) [HT Sequencing] Illumina Genome Analyzer II (Trypanosoma brucei brucei) (GPL10735) University of Glasgow 2010-07-28 Trypanosoma brucei brucei
Trypanosoma brucei brucei		 4
(0 x 4) 		4 by_platform
by_series
18 Dynamic mRNA Expression analysis of cells undergoing synchronous life-cycle differentiation in Trypanosoma brucei (GSE17026) [Oligo Array] JCVI PFGRC Trypanosoma brucei 19K v3 array designed primarily based on strain TREU927, full array version (GPL8834) Centre for Infection Immunity and Evolution 2009-07-09 Trypanosoma brucei
Trypanosoma brucei		 480,000
(19,200 x 25) 		25 by_platform
by_series
19 T. Brucei, Nup-1 Depletion (GSE26256) [Oligo Array] Agilent-026693 Trypanosoma brucei 15K Microarray (GPL11325) Institute for Systems Biology 2010-12-21 Trypanosoma brucei
Trypanosoma brucei		 251,904
(15,744 x 16) 		16 by_platform
by_series
20 Poly(A)-Specifc Ribonuclease 1 (PARN-1) Overexpression in Procyclic T. brucei (GSE20593) [Oligo Array] UMDNJ Trypanosoma brucei 19K (GPL10075) University of Medicine and Dentistry of New Jersey-New Jersey Medical School 2010-03-02 Trypanosoma brucei
Trypanosoma brucei		 115,200
(19,200 x 6) 		6 by_platform
by_series
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