Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(204)
  Primates
(1)
  Rodents
(191)
  Mammals
(6)
  Vertebrates
(19)
  Invertebrates
(51)
  Plants
(84)
  Bacteria
(74)
  Viruses
(1)
  Phages
(0)
  Unclassified
(1)
  All
(632)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(7)
  Tiling Array
(11)
  cDNA Array
(19)
  Oligo Array
(13)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(51)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Determine the extent of inter-species hybridization in adult parasites. (GSE5191) [Oligo Array] QIMR Schistosoma 22k oligonucleotide array (GPL3821) Agilent Technologies 2006-06-29 Schistosoma japonicum,Schistosoma mansoni
Schistosoma japonicum,Schistosoma mansoni
81,204
(20,301 x 4)
4 by_platform
by_series
2 Grass shrimp SAGE libraries (GSE4853) [SAGE NlaIII] SAGE:17:NlaIII:Palaemonetes pugio (GPL3770) University of Southern Mississippi 2006-05-16 Palaemonetes pugio
Palaemonetes pugio
55,016
(13,754 x 4)
4 by_platform
by_series
3 Profiling of WSSV infection in hepatopancreas of shrimp (GSE4955) [cDNA Array] L vannamei microarray 2005 (GPL3817) MarineGenomics.org 2006-05-30 Litopenaeus vannamei
Litopenaeus vannamei
208,896
(13,056 x 16)
16 by_platform
by_series
4 Tissue-specific expression profiles in L. vannamei (GSE4949) [cDNA Array] L vannamei microarray 2005 (GPL3817) MarineGenomics.org 2006-05-30 Litopenaeus vannamei
Litopenaeus vannamei
156,672
(13,056 x 12)
3 3 6 by_platform
by_series
5 Evaluation of technical (array-to-array) reproducibility of L. vannamei microarray (GSE4954) [cDNA Array] L vannamei microarray 2005 (GPL3817) MarineGenomics.org 2006-05-30 Litopenaeus vannamei
Litopenaeus vannamei
65,280
(13,056 x 5)
5 by_platform
by_series
6 Functional genomics of cactus host shifts in Drosophila mojavensis (GSE5148) [cDNA Array] Matzkin-Markow_Dmojavensis_V1.0 (GPL3908) University of Alabama in Huntsville 2006-06-23 Drosophila mojavensis
Drosophila mojavensis
130,560
(13,056 x 10)
10 by_platform
by_series
7 Analysis of sex chromosomes effect on hybrid male sterility (GSE4677) [cDNA Array] CDMC_Drosophila_12k1 (GPL1467) McMaster University 2006-04-17 Drosophila melanogaster,Drosophila sechellia x Drosophila simulans
Drosophila melanogaster,Drosophila sechellia x Drosophila simulans
331,776
(27,648 x 12)
12 by_platform
by_series
8 Quantitative Genomics study of sex dimorphism in D. Melanogaster (GSE5181) [Oligo Array] Whole Genome, Alternative Splicing Drosophila Chip v3 (GPL3809) University of Florida 2006-06-28 Drosophila melanogaster
Drosophila melanogaster
6,501,600
(22,575 x 288)
288 by_platform
by_series
9 Sex and line specific gene expression and alternative splicing in Drosophila revealed (GSE4976) [Oligo Array] Whole Genome, Alternative Splicing Drosophila Chip v3 (GPL3809) University of Florida 2006-06-05 Drosophila melanogaster
Drosophila melanogaster
1,128,750
(22,575 x 50)
50 by_platform
by_series
10 Expression data from adult male and female Drosophila melanogaster antenna, proboscis, and front leg (GSE5189) [Oligo Array] Whole Genome, Alternative Splicing Drosophila Chip v2 (GPL3884) University of Florida 2006-06-29 Drosophila melanogaster
Drosophila melanogaster
541,800
(22,575 x 24)
24 by_platform
by_series
11 Sex-, stage-, and tissue-specific alternative splicing in Drosophila melanogaster (GSE5190) [Oligo Array] Whole Genome, Alternative Splicing Drosophila Chip v2 (GPL3884) University of Florida 2006-06-29 Drosophila melanogaster
Drosophila melanogaster
541,800
(22,575 x 24)
4 4 16 by_platform
by_series
12 Drosophila heat stress response time series analysis (GSE5147) [GeneChip] [DrosGenome1] Affymetrix Drosophila Genome Array (GPL72) Aarhus University 2006-06-23 Drosophila melanogaster
Drosophila melanogaster
504,360
(14,010 x 36)
36 by_platform
by_series
13 Characterization of the Drosophila genome at the nuclear lamina (GSE5089) [cDNA Array] FHCRC Fly 12K v1.0 (GPL1908) Netherlands Cancer Institute 2006-06-16 Drosophila melanogaster
Drosophila melanogaster
425,040
(12,144 x 35)
35 by_platform
by_series
14 Experimental Selection for Drosophila Survival in Extremely Low O2 Environments (GSE4972) [cDNA Array] YUSM (K. White) D. melanogaster cDNA array (GPL3833) University of California, San Diego, School of Medicine 2006-06-01 Drosophila melanogaster
Drosophila melanogaster
329,880
(13,745 x 24)
24 by_platform
by_series
15 mating response genes (GSE5012) [GeneChip] [DrosGenome1] Affymetrix Drosophila Genome Array (GPL72) University of Georgia 2006-06-06 Drosophila melanogaster
Drosophila melanogaster
294,210
(14,010 x 21)
21 by_platform
by_series
16 Genomic responses to Phenobarbital in Drosophila melanogaster (GSE5096) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) HHMI 2006-06-16 Drosophila melanogaster
Drosophila melanogaster
227,424
(18,952 x 12)
12 by_platform
by_series
17 Analysis of the trithorax Group (trxG) genes ash2 and ash1 wing imaginal disc transcriptomes. (GSE4923) [Oligo Array] 01_Drosophila_16K_Universitat_Barcelona (GPL3797) Universitat de Barcelona 2006-05-25 Drosophila melanogaster
Drosophila melanogaster
196,992
(16,416 x 12)
12 by_platform
by_series
18 Pleiotropic fitness effects of the Tre1/Gr5a region in Drosophila (GSE4789) [GeneChip] [DrosGenome1] Affymetrix Drosophila Genome Array (GPL72) North Carolina State University 2006-05-08 Drosophila melanogaster
Drosophila melanogaster
168,120
(14,010 x 12)
12 by_platform
by_series
19 Differential expression in heat resistance selected adult female Drosophila melanogaster (GSE5146) [GeneChip] [DrosGenome1] Affymetrix Drosophila Genome Array (GPL72) Aarhus University 2006-06-23 Drosophila melanogaster
Drosophila melanogaster
140,100
(14,010 x 10)
10 by_platform
by_series
20 IRE1 and XBP-1 effects on the Drosophila unfolded protein response (GSE4867) [cDNA Array] UCSF Drosophila melanogaster 7.8K spotted array (GPL3781) UCSF 2006-05-18 Drosophila melanogaster
Drosophila melanogaster
139,968
(7,776 x 18)
18 by_platform
by_series
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