Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(14,410)
  Primates
(143)
  Rodents
(2,709)
  Mammals
(1,046)
  Vertebrates
(348)
  Invertebrates
(428)
  Plants
(2,170)
  Bacteria
(357)
  Viruses
(0)
  Phages
(0)
  Unclassified
(40)
  All
(21,651)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(231)
  Tiling Array
(12)
  cDNA Array
(31)
  Oligo Array
(105)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(49)
  Other
(0)
  All
(428)
 
  brain
(17)
  blood
(0)
  connective
(0)
  reproductive
(3)
  muscular
(0)
  digestive
(9)
  liver
(0)
  lung
(14)
  urinary
(0)
  endo/exo-crine
(2)
  embryo
(18)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(365)
  all
(428)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1080510 LMN-1 DamID rep1 2,033,813 Centro Andaluz de Biología del Desarrollo 2013-02-08 [Tiling Array] NimbleGen C. elegans ChIP-chip 2.1M Whole-Genome Tiling Array [100718_Celegans180_ChIP_HX1] (GPL16504) genomic Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:GFP::Dam_1 (control) Dam::LMN-1_1 (experiment) title:LMN-1 DamID rep1 description:LMN1 Methylated DNA
2 GSM1080511 LMN-1 DamID rep2 2,033,813 Centro Andaluz de Biología del Desarrollo 2013-02-08 [Tiling Array] NimbleGen C. elegans ChIP-chip 2.1M Whole-Genome Tiling Array [100718_Celegans180_ChIP_HX1] (GPL16504) genomic Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Dam::LMN-1_2 (experiment) GFP::Dam_2 (control) title:LMN-1 DamID rep2 description:LMN2 Methylated DNA
3 GSM1080512 LMN-1 DamID rep3 2,033,813 Centro Andaluz de Biología del Desarrollo 2013-02-08 [Tiling Array] NimbleGen C. elegans ChIP-chip 2.1M Whole-Genome Tiling Array [100718_Celegans180_ChIP_HX1] (GPL16504) genomic Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:GFP:Dam_3 (control) Dam::LMN-1_3(experiment) title:LMN-1 DamID rep3 description:LMN3 Methylated DNA
4 GSM1080513 EMR-1 DamID rep1 2,033,813 Centro Andaluz de Biología del Desarrollo 2013-02-08 [Tiling Array] NimbleGen C. elegans ChIP-chip 2.1M Whole-Genome Tiling Array [100718_Celegans180_ChIP_HX1] (GPL16504) genomic Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:GFP::Dam_4 (control) Dam::EMR-1_1 (experiment) title:EMR-1 DamID rep1 description:EMR1 Methylated DNA
5 GSM1080514 EMR-1 DamID rep2 2,033,813 Centro Andaluz de Biología del Desarrollo 2013-02-08 [Tiling Array] NimbleGen C. elegans ChIP-chip 2.1M Whole-Genome Tiling Array [100718_Celegans180_ChIP_HX1] (GPL16504) genomic Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Dam::EMR-1_2 (experiment) GFP:Dam_5 (control) title:EMR-1 DamID rep2 description:EMR2 Methylated DNA
6 GSM1080515 EMR-1 DamID rep3 2,033,813 Centro Andaluz de Biología del Desarrollo 2013-02-08 [Tiling Array] NimbleGen C. elegans ChIP-chip 2.1M Whole-Genome Tiling Array [100718_Celegans180_ChIP_HX1] (GPL16504) genomic Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:GFP::Dam_6 (control) Dam::EMR-_3 (experiment) title:EMR-1 DamID rep3 description:EMR3 Methylated DNA
7 GSM1080516 LMN-1 DamID in emr-1 (gk119) rep.1 2,033,813 Centro Andaluz de Biología del Desarrollo 2013-02-08 [Tiling Array] NimbleGen C. elegans ChIP-chip 2.1M Whole-Genome Tiling Array [100718_Celegans180_ChIP_HX1] (GPL16504) genomic Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:GFP:Dam emr-1(gk119)_1 (control) Dam::LMN-1 emr-1(gk119)_1 (experiment) title:LMN-1 DamID in emr-1 (gk119) rep.1 description:LMNemr1 Methylated DNA
8 GSM1080517 LMN-1 DamID in emr-1 (gk119) rep.2 2,033,813 Centro Andaluz de Biología del Desarrollo 2013-02-08 [Tiling Array] NimbleGen C. elegans ChIP-chip 2.1M Whole-Genome Tiling Array [100718_Celegans180_ChIP_HX1] (GPL16504) genomic Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Dam::LMN-1 emr-1(gk119)_2 (experiment) GFP::Dam emr-1(gk119)_2 (control) title:LMN-1 DamID in emr-1 (gk119) rep.2 description:LMNemr2 Methylated DNA
9 GSM1080518 LMN-1 DamID in emr-1 (gk119) rep.3 2,033,813 Centro Andaluz de Biología del Desarrollo 2013-02-08 [Tiling Array] NimbleGen C. elegans ChIP-chip 2.1M Whole-Genome Tiling Array [100718_Celegans180_ChIP_HX1] (GPL16504) genomic Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:GFP::LMN-1 emr-1(gk119)_3 (control) Dam::LMN-1 emr-1(gk119)_3 (experiment) title:LMN-1 DamID in emr-1 (gk119) rep.3 description:LMNemr3 Methylated DNA
10 GSM1080519 LMN-1 DamID in lem-2 (tm1582) rep.1 2,033,813 Centro Andaluz de Biología del Desarrollo 2013-02-08 [Tiling Array] NimbleGen C. elegans ChIP-chip 2.1M Whole-Genome Tiling Array [100718_Celegans180_ChIP_HX1] (GPL16504) genomic Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:GFP::Dam lem-2(tm1582)_1 (control) Dam::LMN-1 lem-2(tm1582)_1 (experiment) title:LMN-1 DamID in lem-2 (tm1582) rep.1 description:LMNlem1 Methylated DNA
11 GSM1080520 LMN-1 DamID in lem-2 (tm1582) rep.2 2,033,813 Centro Andaluz de Biología del Desarrollo 2013-02-08 [Tiling Array] NimbleGen C. elegans ChIP-chip 2.1M Whole-Genome Tiling Array [100718_Celegans180_ChIP_HX1] (GPL16504) genomic Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:GFP::Dam lem-2(tm1582)_2 (control) Dam::LMN-1 lem-2(tm1582)_2 (experiment) title:LMN-1 DamID in lem-2 (tm1582) rep.2 description:LMNlem2 Methylated DNA
12 GSM1080521 LMN-1 DamID in lem-2 (tm1582) rep.3 2,033,813 Centro Andaluz de Biología del Desarrollo 2013-02-08 [Tiling Array] NimbleGen C. elegans ChIP-chip 2.1M Whole-Genome Tiling Array [100718_Celegans180_ChIP_HX1] (GPL16504) genomic Caenorhabditis elegans
Caenorhabditis elegans
unclassified source_name:Dam::LMN-1 lem-2(tm1582_3) (experiment) GFP::Dam lem-2(tm1582)_3 (control) title:LMN-1 DamID in lem-2 (tm1582) rep.3 description:LMNlem3 Methylated DNA
13 GSM353326 Insulin pathway activation - replicate 1 42,034 CMRB 2008-12-21 [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) RNA Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:insulin treated cells control title:Insulin pathway activation - replicate 1 description:Global analysis of alternative splicing regulation by insulin signalling in Drosophila cells
14 GSM353327 Insulin pathway activation - replicate 2 42,034 CMRB 2008-12-21 [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) RNA Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:insulin treated cells control title:Insulin pathway activation - replicate 2 description:Global analysis of alternative splicing regulation by insulin signalling in Drosophila cells
15 GSM353328 Insulin pathway activation - replicate 3 42,034 CMRB 2008-12-21 [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) RNA Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:insulin treated cells control title:Insulin pathway activation - replicate 3 description:Global analysis of alternative splicing regulation by insulin signalling in Drosophila cells
16 GSM353356 wingless pathway activation - replicate 1 42,034 CMRB 2008-12-21 [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) RNA Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:wingless activated S2 cells control S2 cells title:wingless pathway activation - replicate 1 description:Global analysis of alternative splicing regulation by wingless signalling in Drosophila cells
17 GSM353357 wingless pathway activation - replicate 2 42,034 CMRB 2008-12-21 [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) RNA Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:wingless activated S2 cells control S2 cells title:wingless pathway activation - replicate 2 description:Global analysis of alternative splicing regulation by wingless signalling in Drosophila cells
18 GSM353358 wingless pathway activation - replicate 3 42,034 CMRB 2008-12-22 [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) RNA Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:wingless activated S2 cells control S2 cells title:wingless pathway activation - replicate 3 description:Global analysis of alternative splicing regulation by wingless signalling in Drosophila cells
19 GSM284382 Transcriptome analysis of Leishmania infantum PNA+ procyclic and PNA- metacyclic promastigotes 30,576 CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS 2008-04-25 [cDNA Array] Complete shotgun genomic Leishmania infantum DNA microarrays (GPL6781) RNA Leishmania infantum
Leishmania infantum
unclassified source_name:culture, PNA+ PROCYCLIC PROMASTIGOTES isolate MCAN/ES/98/10445 culture, PNA- METACYCLIC PROMASTIGOTES isolate MCAN/ES/98/10445 title:Transcriptome analysis of Leishmania infantum PNA+ procyclic and PNA- metacyclic promastigotes description:RNA INTEGRITY WAS CHECKED WITH AGILENT 6000 BIOANALYZER, USING AN RNA 6000 NANO CHIP
20 GSM284383 Transcriptome analysis of PNA+ and PNA- L. infantum promastigotes brep2 30,576 CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS 2008-04-25 [cDNA Array] Complete shotgun genomic Leishmania infantum DNA microarrays (GPL6781) RNA Leishmania infantum
Leishmania infantum
unclassified source_name:culture, PNA+ PROCYCLIC PROMASTIGOTES isolate MCAN/ES/98/10445 culture, PNA- METACYCLIC PROMASTIGOTES isolate MCAN/ES/98/10445 title:Transcriptome analysis of PNA+ and PNA- L. infantum promastigotes brep2 description:RNA INTEGRITY WAS CHECKED WITH AGILENT 6000 BIOANALYZER, USING AN RNA 6000 NANO CHIP
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