Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(10,037)
  Primates
(106)
  Rodents
(1,894)
  Mammals
(692)
  Vertebrates
(418)
  Invertebrates
(220)
  Plants
(1,800)
  Bacteria
(367)
  Viruses
(0)
  Phages
(0)
  Unclassified
(28)
  All
(15,562)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(57)
  Tiling Array
(0)
  cDNA Array
(31)
  Oligo Array
(96)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(36)
  Other
(0)
  All
(220)
 
  brain
(13)
  blood
(0)
  connective
(0)
  reproductive
(3)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(14)
  urinary
(0)
  endo/exo-crine
(2)
  embryo
(18)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(170)
  all
(220)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM353326 Insulin pathway activation - replicate 1 42,034 CMRB 2008-12-21 [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) RNA Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:insulin treated cells control title:Insulin pathway activation - replicate 1 description:Global analysis of alternative splicing regulation by insulin signalling in Drosophila cells
2 GSM353327 Insulin pathway activation - replicate 2 42,034 CMRB 2008-12-21 [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) RNA Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:insulin treated cells control title:Insulin pathway activation - replicate 2 description:Global analysis of alternative splicing regulation by insulin signalling in Drosophila cells
3 GSM353328 Insulin pathway activation - replicate 3 42,034 CMRB 2008-12-21 [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) RNA Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:insulin treated cells control title:Insulin pathway activation - replicate 3 description:Global analysis of alternative splicing regulation by insulin signalling in Drosophila cells
4 GSM353356 wingless pathway activation - replicate 1 42,034 CMRB 2008-12-21 [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) RNA Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:wingless activated S2 cells control S2 cells title:wingless pathway activation - replicate 1 description:Global analysis of alternative splicing regulation by wingless signalling in Drosophila cells
5 GSM353357 wingless pathway activation - replicate 2 42,034 CMRB 2008-12-21 [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) RNA Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:wingless activated S2 cells control S2 cells title:wingless pathway activation - replicate 2 description:Global analysis of alternative splicing regulation by wingless signalling in Drosophila cells
6 GSM353358 wingless pathway activation - replicate 3 42,034 CMRB 2008-12-22 [Oligo Array] Blanchette/Green Splice Junction array (GPL7508) RNA Drosophila melanogaster
Drosophila melanogaster
unclassified source_name:wingless activated S2 cells control S2 cells title:wingless pathway activation - replicate 3 description:Global analysis of alternative splicing regulation by wingless signalling in Drosophila cells
7 GSM284382 Transcriptome analysis of Leishmania infantum PNA+ procyclic and PNA- metacyclic promastigotes 30,576 CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS 2008-04-25 [cDNA Array] Complete shotgun genomic Leishmania infantum DNA microarrays (GPL6781) RNA Leishmania infantum
Leishmania infantum
unclassified source_name:culture, PNA+ PROCYCLIC PROMASTIGOTES isolate MCAN/ES/98/10445 culture, PNA- METACYCLIC PROMASTIGOTES isolate MCAN/ES/98/10445 title:Transcriptome analysis of Leishmania infantum PNA+ procyclic and PNA- metacyclic promastigotes description:RNA INTEGRITY WAS CHECKED WITH AGILENT 6000 BIOANALYZER, USING AN RNA 6000 NANO CHIP
8 GSM284383 Transcriptome analysis of PNA+ and PNA- L. infantum promastigotes brep2 30,576 CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS 2008-04-25 [cDNA Array] Complete shotgun genomic Leishmania infantum DNA microarrays (GPL6781) RNA Leishmania infantum
Leishmania infantum
unclassified source_name:culture, PNA+ PROCYCLIC PROMASTIGOTES isolate MCAN/ES/98/10445 culture, PNA- METACYCLIC PROMASTIGOTES isolate MCAN/ES/98/10445 title:Transcriptome analysis of PNA+ and PNA- L. infantum promastigotes brep2 description:RNA INTEGRITY WAS CHECKED WITH AGILENT 6000 BIOANALYZER, USING AN RNA 6000 NANO CHIP
9 GSM284784 Transcriptome analysis of PNA+ and PNA- L. infantum promastigotes brep1 30,576 CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS 2008-04-25 [cDNA Array] Complete shotgun genomic Leishmania infantum DNA microarrays (GPL6781) RNA Leishmania infantum
Leishmania infantum
unclassified source_name:culture, PNA+ PROCYCLIC PROMASTIGOTES isolate MCAN/ES/98/10445 culture, PNA- METACYCLIC PROMASTIGOTES isolate MCAN/ES/98/10445 title:Transcriptome analysis of PNA+ and PNA- L. infantum promastigotes brep1 description:RNA INTEGRITY WAS CHECKED WITH AGILENT 6000 BIOANALYZER, USING AN RNA 6000 NANO CHIP
10 GSM216621 TbDRBD3 RNAi, biological replicate #1, -tet is Cy3, + tet is Cy5 24,576 CSIC 2007-08-09 [cDNA Array] Brems/Hoheisel/Clayton T. brucei genomic array (DKFZ/ZMBH, Heidelberg) (GPL5721) RNA Trypanosoma brucei
Trypanosoma brucei
unclassified source_name:Uninduced RNAi TbDRBD3 cells (- tet) Induced RNAi TbDRBD3 cells (+ tet) title:TbDRBD3 RNAi, biological replicate #1, -tet is Cy3, + tet is Cy5 description:None
11 GSM216644 TbDRBD3 RNAi, biological replicate #1, -tet is Cy5, + tet is Cy3 (dye swap) 24,576 CSIC 2007-08-09 [cDNA Array] Brems/Hoheisel/Clayton T. brucei genomic array (DKFZ/ZMBH, Heidelberg) (GPL5721) RNA Trypanosoma brucei
Trypanosoma brucei
unclassified source_name:Uninduced RNAi TbDRBD3 cells (- tet) Induced RNAi TbDRBD3 cells (+ tet) title:TbDRBD3 RNAi, biological replicate #1, -tet is Cy5, + tet is Cy3 (dye swap) description:None
12 GSM216648 TbDRBD3 RNAi, biological replicate #2, -tet is Cy3, + tet is Cy5 24,576 CSIC 2007-08-09 [cDNA Array] Brems/Hoheisel/Clayton T. brucei genomic array (DKFZ/ZMBH, Heidelberg) (GPL5721) RNA Trypanosoma brucei
Trypanosoma brucei
unclassified source_name:Uninduced RNAi TbDRBD3 cells (- tet) Induced RNAi TbDRBD3 cells (+ tet) title:TbDRBD3 RNAi, biological replicate #2, -tet is Cy3, + tet is Cy5 description:None
13 GSM216652 TbDRBD3 RNAi, biological replicate #2, -tet is Cy5, + tet is Cy3 (dye swap) 24,576 CSIC 2007-08-09 [cDNA Array] Brems/Hoheisel/Clayton T. brucei genomic array (DKFZ/ZMBH, Heidelberg) (GPL5721) RNA Trypanosoma brucei
Trypanosoma brucei
unclassified source_name:Uninduced RNAi TbDRBD3 cells (- tet) Induced RNAi TbDRBD3 cells (+ tet) title:TbDRBD3 RNAi, biological replicate #2, -tet is Cy5, + tet is Cy3 (dye swap) description:None
14 GSM278884 Pvivax vs Pfalciparum control specificity 251485710001 22,575 Barcelona Centre for International Health Research 2008-04-02 [Oligo Array] P. vivax exon array v1.0 using oligos designed by Z. Bozdech and G. Hu (GPL6667) RNA Plasmodium vivax,Plasmodium falciparum
Plasmodium vivax,Plasmodium falciparum
unclassified source_name:Plasmodium vivax Sal1 strain Plasmodium falciparum title:Pvivax vs Pfalciparum control specificity 251485710001 description:Agilent's recommended procedures
15 GSM278885 Pvivax Sal1 vs Pvivax patient1 251485710006 22,575 Barcelona Centre for International Health Research 2008-04-02 [Oligo Array] P. vivax exon array v1.0 using oligos designed by Z. Bozdech and G. Hu (GPL6667) RNA Plasmodium vivax
Plasmodium vivax
unclassified source_name:Plasmodium vivax Sal-1 Plasmodium vivax patient 1 title:Pvivax Sal1 vs Pvivax patient1 251485710006 description:Agilent's recommended procedures
16 GSM278886 Pvivax Sal1 vs Pvivax patient2 251485710007 22,575 Barcelona Centre for International Health Research 2008-04-02 [Oligo Array] P. vivax exon array v1.0 using oligos designed by Z. Bozdech and G. Hu (GPL6667) RNA Plasmodium vivax
Plasmodium vivax
unclassified source_name:Plasmodium vivax Sal-1 P. vivax isolate patient 2 title:Pvivax Sal1 vs Pvivax patient2 251485710007 description:Agilent's recommended procedures
17 GSM282003 PvSp -1 vs PvSp -1 (self-self) 251485710025 22,575 Barcelona Centre for International Health Research 2008-04-16 [Oligo Array] P. vivax exon array v1.0 using oligos designed by Z. Bozdech and G. Hu (GPL6667) RNA Plasmodium vivax
Plasmodium vivax
unclassified source_name:PvSp -1 title:PvSp -1 vs PvSp -1 (self-self) 251485710025 description:Agilent's recommended procedures
18 GSM282004 Sp -1 vs PvSp -1 251485710023 22,575 Barcelona Centre for International Health Research 2008-04-16 [Oligo Array] P. vivax exon array v1.0 using oligos designed by Z. Bozdech and G. Hu (GPL6667) RNA Plasmodium vivax
Plasmodium vivax
unclassified source_name:Sp -1 PvSp -1 title:Sp -1 vs PvSp -1 251485710023 description:Agilent's recommended procedures
19 GSM282005 Sp -2 vs PvSp -1 251485710024 22,575 Barcelona Centre for International Health Research 2008-04-16 [Oligo Array] P. vivax exon array v1.0 using oligos designed by Z. Bozdech and G. Hu (GPL6667) RNA Plasmodium vivax
Plasmodium vivax
unclassified source_name:Sp -2 PvSp -1 title:Sp -2 vs PvSp -1 251485710024 description:Agilent's recommended procedures
20 GSM282006 Sp -3 vs PvSp -1 251485710027 22,575 Barcelona Centre for International Health Research 2008-04-16 [Oligo Array] P. vivax exon array v1.0 using oligos designed by Z. Bozdech and G. Hu (GPL6667) RNA Plasmodium vivax
Plasmodium vivax
unclassified source_name:Sp -3 PvSp -1 title:Sp -3 vs PvSp -1 251485710027 description:Agilent's recommended procedures
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