Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(17,356)

Invertebrates
(1,567)

Phages
(0)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(0)

HT-Seq
(121)

Other
(0)

All
(1,567)

muscular
(0)

liver
(0)

lung
(0)

urinary
(0)

endo/exo-crine
(5)

embryo
(114)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(78)

unclassified
(1,146)

all
(1,567)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM391380	H2A_bulk_(C2.2AIPD_237467)	2,130,022	Fred Hutchinson Cancer Research Center	2009-04-10	[Tiling Array] Henikoff_Dmel_r52_ChIP tiling design (GPL6888)	genomic	Drosophila melanogaster	unclassified	source_name:Drosophila S2 cells, H2A DNA pull-down Drosophila S2 cells, H2A DNA input title:H2A_bulk_(C2.2AIPD_237467) description:Biotin-H2A pulldown of EDTA-needle-extracted chromatin
2	GSM391381	H2Av_bulk_(C2.2AVIPD_237448)	2,130,022	Fred Hutchinson Cancer Research Center	2009-04-10	[Tiling Array] Henikoff_Dmel_r52_ChIP tiling design (GPL6888)	genomic	Drosophila melanogaster	unclassified	source_name:Drosophila S2 cells, H2Av DNA pull-down Drosophila S2 cells, H2Av DNA input title:H2Av_bulk_(C2.2AVIPD_237448) description:Biotin-H2Av pulldown of EDTA-needle-extracted chromatin
3	GSM417043	SDQ3146_SDC2_N2_MXemb_ChIP_replicate1	1,976,229	UNC-Chapel Hill	2009-06-12	[Tiling Array] 080922_modEncode_Caenorhabditis elegans_2M tiling chip_HX1 (GPL8647)	genomic	Caenorhabditis elegans	embryo	SDC-2 ChIP-chip from N2 mixed stage embryos. An affinity purified rabbit polyclonal antibody to SDC-2 obtained from SDI (SDC-2 Q3148). 5 ug used per ChIP.
4	GSM417044	SDQ3146_SDC2_N2_MXemb_ChIP_replicate2	1,976,229	UNC-Chapel Hill	2009-06-12	[Tiling Array] 080922_modEncode_Caenorhabditis elegans_2M tiling chip_HX1 (GPL8647)	genomic	Caenorhabditis elegans	embryo	SDC-2 ChIP-chip from N2 mixed stage embryos. An affinity purified rabbit polyclonal antibody to SDC-2 obtained from SDI (SDC-2 Q3148). 5 ug used per ChIP.
5	GSM417045	SDQ3148_SDC2_N2_MXemb_ChIP_replicate1	1,976,229	UNC-Chapel Hill	2009-06-12	[Tiling Array] 080922_modEncode_Caenorhabditis elegans_2M tiling chip_HX1 (GPL8647)	genomic	Caenorhabditis elegans	embryo	SDC-2 ChIP-chip from N2 mixed stage embryos. An affinity purified rabbit polyclonal antibody to SDC-2 obtained from SDI (SDC-2 Q3148). 5 ug used per ChIP.
6	GSM417019	CVMMS126R_8WG16_N2_L4_ChIP_replicate2A	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	unclassified	source_name:ChIP DNA Input genomic DNA title:CVMMS126R_8WG16_N2_L4_ChIP_replicate2A description:PolII ChIP data in N2 L4s. A mouse monoclonal antibody which recognizes primarily the unphosphorylated RNA Pol II CTD (8WG16) obtained from Covance (MMS126R) was used for ChIP.
7	GSM417020	CVMMS126R_8WG16_N2_L4_ChIP_replicate2B	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	unclassified	source_name:ChIP DNA Input genomic DNA title:CVMMS126R_8WG16_N2_L4_ChIP_replicate2B description:PolII ChIP data in N2 L4s. A mouse monoclonal antibody which recognizes primarily the unphosphorylated RNA Pol II CTD (8WG16) obtained from Covance (MMS126R) was used for ChIP.
8	GSM417021	JL00001_DPY27_11dh_MXemb_ChIP_replicate1	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	embryo	DPY-27 ChIP-chip from 11dh X-I fusion strain mixed stage embryos. An affinity purified rabbit polyclonal antibody to DPY-27 was used.
9	GSM417022	JL00001_DPY27_11dh_MXemb_ChIP_replicate2	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	embryo	DPY-27 ChIP-chip from 11dh X-I fusion strain mixed stage embryos. An affinity purified rabbit polyclonal antibody to DPY-27 was used.
10	GSM417023	JL00001_DPY27_N2_L4_ChIP_replicate1	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	unclassified	source_name:Input genomic DNA ChIP DNA title:JL00001_DPY27_N2_L4_ChIP_replicate1 description:DPY-27 ChIP-chip from N2 L4 larval stage. An affinity purified rabbit polyclonal antibody to DPY-27 was used.
11	GSM417024	JL00001_DPY27_N2_L4_ChIP_replicate2A	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	unclassified	source_name:ChIP DNA Input genomic DNA title:JL00001_DPY27_N2_L4_ChIP_replicate2A description:DPY-27 ChIP-chip from N2 L4 larval stage. An affinity purified rabbit polyclonal antibody to DPY-27 was used.
12	GSM417025	JL00001_DPY27_N2_L4_ChIP_replicate2B	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	unclassified	source_name:ChIP DNA Input genomic DNA title:JL00001_DPY27_N2_L4_ChIP_replicate2B description:DPY-27 ChIP-chip from N2 L4 larval stage. An affinity purified rabbit polyclonal antibody to DPY-27 was used.
13	GSM417026	JL00001_DPY27_N2_L4_ChIP_replicate3	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	unclassified	source_name:Input genomic DNA ChIP DNA title:JL00001_DPY27_N2_L4_ChIP_replicate3 description:DPY-27 ChIP-chip from N2 L4 larval stage. An affinity purified rabbit polyclonal antibody to DPY-27 was used.
14	GSM417027	JL00001_DPY27_YPT41_MXemb_ChIP_replicate1	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	embryo	DPY-27 ChIP-chip from YPT41 X-II fusion strain mixed stage embryos. An affinity purified rabbit polyclonal antibody to DPY-27 was used.
15	GSM417028	JL00001_DPY27_YPT41_MXemb_ChIP_replicate2	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	embryo	DPY-27 ChIP-chip from YPT41 X-II fusion strain mixed stage embryos. An affinity purified rabbit polyclonal antibody to DPY-27 was used.
16	GSM417034	JL00003_DPY26_N2_MXemb_ChIP_replicate1	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	embryo	DPY-26 ChIP-chip from N2 mixed stage embryos. An affinity purified rabbit polyclonal antibody to DPY-26 was used.
17	GSM417035	JL00003_DPY26_N2_MXemb_ChIP_replicate2	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	embryo	DPY-26 ChIP-chip from N2 mixed stage embryos. An affinity purified rabbit polyclonal antibody to DPY-26 was used.
18	GSM417036	JL00003_DPY26_N2_MXemb_ChIP_replicate3	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	embryo	DPY-26 ChIP-chip from N2 mixed stage embryos. An affinity purified rabbit polyclonal antibody to DPY-26 was used.
19	GSM417037	JL00004_MIX1_N2_MXemb_ChIP_replicate1	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	embryo	MIX-1 ChIP-chip from N2 mixed stage embryos. An affinity purified rabbit polyclonal antibody to MIX-1 was used.
20	GSM417038	JL00004_MIX1_N2_MXemb_ChIP_replicate2	1,973,075	UNC-Chapel Hill	2009-06-12	[Tiling Array] UNC Celegans 2.1mil HX1 (C elegans ChIP HX1) (GPL7685)	genomic	Caenorhabditis elegans	embryo	MIX-1 ChIP-chip from N2 mixed stage embryos. An affinity purified rabbit polyclonal antibody to MIX-1 was used.

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