Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Invertebrates
(38,793)

Plants
(93,301)

Bacteria
(39,613)

SAGE RsaI
(0)

SAGE Sau3A
(0)

Protein Array
(0)

Antibody
(0)

All
(38,793)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(2,285)

unclassified
(25,266)

all
(38,793)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM336052	embryo hermaphrodites	9,306,695	Yale University	2008-10-23	[HT Sequencing] Illumina Genome Analyzer (Caenorhabditis elegans) (GPL9309)	SRA	Caenorhabditis elegans	embryo	Embryo_hermaphrodites
2	GSM506207	Kc PSC 3	6,247,570	University of Vienna	2010-02-03	[HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058)	SRA	Drosophila melanogaster	unclassified	source_name:Kc genomic DNA title:Kc PSC 3 description:Chromatin was prepared from Kc cells and ChIP using an antibody against Drosophila PSC was performed.
3	GSM427332	Illumina sequencing of small RNAs from post-gastrulation C. elegans embryos	6,175,141	Max-Delbrueck Centrum Berlin-Buch	2009-07-14	[HT Sequencing] Illumina Genome Analyzer II (Caenorhabditis elegans) (GPL9269)	SRA	Caenorhabditis elegans	embryo	Post-gastrulation embryo
4	GSM506206	Kc PSC 2	6,056,463	University of Vienna	2010-02-03	[HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058)	SRA	Drosophila melanogaster	unclassified	source_name:Kc genomic DNA title:Kc PSC 2 description:Chromatin was prepared from Kc cells and ChIP using an antibody against Drosophila PSC was performed.
5	GSM628271	r2d2[1] ovary total RNA	5,929,819	Memorial Sloan Kettering Cancer Center	2010-11-23	[HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058)	SRA	Drosophila melanogaster	ovary	r2d2[1] ovary total RNA
6	GSM628272	ago2[414] ovary total RNA	5,506,450	Memorial Sloan Kettering Cancer Center	2010-11-23	[HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058)	SRA	Drosophila melanogaster	ovary	ago2[414] ovary total RNA
7	GSM385821	Drosophila OSS cell small RNA libraries, rep3	5,373,262	Memorial Sloan Kettering Cancer Center	2009-03-24	[HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058)	SRA	Drosophila melanogaster	unclassified	source_name:Drosophila OSS cells title:Drosophila OSS cell small RNA libraries, rep3 description:Small RNA data (technical replicate).
8	GSM639446	tribolium_adults	5,151,841	University of Manchester	2010-12-13	[HT Sequencing] AB SOLiD System (Tribolium castaneum) (GPL11311)	SRA	Tribolium castaneum	unclassified	source_name:Tribolium castaneum adult individuals title:tribolium_adults description:Total endogenous small RNAs from Tribolium castaneum adults.
9	GSM336086	young adult males	5,084,112	Yale University	2008-10-23	[HT Sequencing] Illumina Genome Analyzer (Caenorhabditis elegans) (GPL9309)	SRA	Caenorhabditis elegans	unclassified	source_name:young adult_males title:young adult males description:RNA enriched for small RNA species (<200nt)
10	GSM847430	wild type, 68 h, untreated	4,481,545	Massachusetts General Hospital	2011-12-09	[HT Sequencing] Illumina HiSeq 2000 (Caenorhabditis elegans) (GPL13657)	SRA	Caenorhabditis elegans	pooled	Whole worms, adult, untreated
11	GSM336055	mid-L1 hermaphrodites	4,265,902	Yale University	2008-10-23	[HT Sequencing] Illumina Genome Analyzer (Caenorhabditis elegans) (GPL9309)	SRA	Caenorhabditis elegans	unclassified	source_name:mid-L1_hermaphrodites title:mid-L1 hermaphrodites description:RNA enriched for small RNA species (<200nt)
12	GSM385748	Drosophila OSS cell small RNA libraries, rep2	4,258,000	Memorial Sloan Kettering Cancer Center	2009-03-24	[HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058)	SRA	Drosophila melanogaster	unclassified	source_name:Drosophila OSS cells title:Drosophila OSS cell small RNA libraries, rep2 description:Small RNA data (technical replicate).
13	GSM442434	Kc RNA	4,228,348	University of Vienna	2009-08-19	[HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058)	SRA	Drosophila melanogaster	unclassified	source_name:Kc RNA title:Kc RNA description:contains filtered reads
14	GSM847423	control transgene	4,202,346	Massachusetts General Hospital	2011-12-09	[HT Sequencing] Illumina Genome Analyzer II (Caenorhabditis elegans) (GPL9269)	SRA	Caenorhabditis elegans	pooled	Whole worms, control transgene
15	GSM847429	wild type, 52 h, untreated	4,080,668	Massachusetts General Hospital	2011-12-09	[HT Sequencing] Illumina HiSeq 2000 (Caenorhabditis elegans) (GPL13657)	SRA	Caenorhabditis elegans	pooled	Whole worms, larvae, untreated
16	GSM336058	mid-L3 hermaphrodites	3,987,491	Yale University	2008-10-23	[HT Sequencing] Illumina Genome Analyzer (Caenorhabditis elegans) (GPL9309)	SRA	Caenorhabditis elegans	unclassified	source_name:mid-L3_hermaphrodites title:mid-L3 hermaphrodites description:RNA enriched for small RNA species (<200nt)
17	GSM506205	Kc PSC 1	3,959,654	University of Vienna	2010-02-03	[HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058)	SRA	Drosophila melanogaster	unclassified	source_name:Kc genomic DNA title:Kc PSC 1 description:Chromatin was prepared from Kc cells and ChIP using an antibody against Drosophila PSC was performed.
18	GSM336056	mid-L2 hermaphrodites	3,870,829	Yale University	2008-10-23	[HT Sequencing] Illumina Genome Analyzer (Caenorhabditis elegans) (GPL9309)	SRA	Caenorhabditis elegans	unclassified	source_name:mid-L2_hermaphrodites title:mid-L2 hermaphrodites description:RNA enriched for small RNA species (<200nt)
19	GSM371638	small RNA from S2 cells (S2-NP)	3,814,663	Memorial Sloan Kettering Cancer Center	2009-02-16	[HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058)	SRA	Drosophila melanogaster	unclassified	source_name:Drosophila melanogaster S2 cells title:small RNA from S2 cells (S2-NP) description:Small RNA data.
20	GSM443998	cde1input	3,669,796	Hubrecht Institute	2009-08-24	[HT Sequencing] Illumina Genome Analyzer (Caenorhabditis elegans) (GPL9309)	SRA	Caenorhabditis elegans	unclassified	source_name:cde1input title:cde1input description:Small RNA sequence data

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