Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(16,283)		   Primates
(80)		   Rodents
(6,896)		   Mammals
(298)		   Vertebrates
(469)		   Invertebrates
(517)		   Plants
(5,385)		   Bacteria
(1,328)		   Viruses
(9)		   Phages
(0)		   Unclassified
(100)		   All
(31,365)		  
  SAGE NlaIII
(2)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(151)		   Tiling Array
(50)		   cDNA Array
(0)		   Oligo Array
(311)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(3)		   Other
(0)		   All
(517)		  
  brain
(36)		   blood
(3)		   connective
(0)		   reproductive
(73)		   muscular
(6)		   digestive
(48)		   liver
(17)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(17)		   embryo
(19)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(12)		   unclassified
(286)		   all
(517)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM378200 FLX sequencing of Piwi-associated small RNAs extracted from Drosophila ovarian somatic cells (OSC) 10,890 National Institute of Advanced Industrial Science and Technology 2009-03-06 [HT Sequencing] 454 GS FLX (Drosophila melanogaster) (GPL9333) SRA Drosophila melanogaster
Drosophila melanogaster		 ovary ovarian somatic cell (OSC)
2 GSM590049 50-75 nt piR-ILs associated with Armitage from OSCs 0 Keio University School of Medicine 2010-09-02 [HT Sequencing] 454 GS (Drosophila melanogaster) (GPL10876) SRA Drosophila melanogaster
Drosophila melanogaster		 ovary Ovarian somatic cell (OSC) line
3 GSM119465 Bombyx ovary SAGE library #1 40,311 The University of Tokyo 2006-07-10 [SAGE NlaIII] SAGE:16:NlaIII:Bombyx mori (GPL3984) SAGE Bombyx mori
Bombyx mori		 ovary ovary (stage1-stage3)
4 GSM119467 Bombyx ovary SAGE library #2 16,740 The University of Tokyo 2006-07-10 [SAGE NlaIII] SAGE:16:NlaIII:Bombyx mori (GPL3984) SAGE Bombyx mori
Bombyx mori		 ovary ovary (stage2-3)
5 GSM162972 trypomastigote 54,675 Juntendo University Graduate School of Medicine 2007-02-16 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Trypanosoma cruzi
Trypanosoma cruzi		 unclassified source_name:trypomastigote title:trypomastigote description:control sample to check the cross-hybridization between T.cruzi cRNA and human chip
6 GSM856896 wild type liver stage 1 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato wild type liver stage
7 GSM856897 wild type liver stage 2 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato wild type liver stage
8 GSM856898 wild type liver stage 3 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato wild type liver stage
9 GSM856899 wild type liver stage 4 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato wild type liver stage
10 GSM856900 wild type liver stage 5 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato wild type liver stage
11 GSM856901 wild type liver stage 6 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato wild type liver stage
12 GSM856902 wild type liver stage 7 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato wild type liver stage
13 GSM856903 wild type liver stage 8 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato wild type liver stage
14 GSM856904 wild type liver stage 9 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato wild type liver stage
15 GSM856905 wild type liver stage 10 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato wild type liver stage
16 GSM856906 AP2-L KO liver stage 1 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato AP2-L KO liver stage
17 GSM856907 AP2-L KO liver stage 2 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato AP2-L KO liver stage
18 GSM856908 AP2-L KO liver stage 3 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato AP2-L KO liver stage
19 GSM856909 AP2-L KO liver stage 4 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato AP2-L KO liver stage
20 GSM856910 AP2-L KO liver stage 5 45,220 mie university 2012-01-05 [Oligo Array] Agilent-031544 Custom Plasmodium berghei str. ANKA array [PBANKA1] (GPL15092) RNA Plasmodium berghei
Plasmodium berghei		 liver/hepato AP2-L KO liver stage
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