Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(66)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(4)
  GeneChip
(6,935)
  Tiling Array
(4,286)
  cDNA Array
(7,649)
  Oligo Array
(13,277)
  Bead Array
(406)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(6)
  HT-Seq
(4,700)
  Other
(9)
  All
(37,338)
 
  brain
(2,332)
  blood
(584)
  connective
(437)
  reproductive
(1,361)
  muscular
(258)
  digestive
(816)
  liver
(471)
  lung
(552)
  urinary
(65)
  endo/exo-crine
(590)
  embryo
(3,085)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(2,242)
  unclassified
(24,545)
  all
(37,338)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM502371 Immature radula rep1 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
unclassified source_name:Pooled immature radula sac tissue title:Immature radula rep1 description:none
2 GSM502372 Immature radula rep2 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
unclassified source_name:Pooled immature radula sac tissue title:Immature radula rep2 description:none
3 GSM502373 Immature radula rep3 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
unclassified source_name:Pooled immature radula sac tissue title:Immature radula rep3 description:none
4 GSM502374 Immature radula rep4 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
unclassified source_name:Pooled immature radula sac tissue title:Immature radula rep4 description:none
5 GSM502375 Iron radula rep1 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
unclassified source_name:Pooled iron depositing radula sac tissue title:Iron radula rep1 description:none
6 GSM502376 Iron radula rep2 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
unclassified source_name:Pooled iron depositing radula sac tissue title:Iron radula rep2 description:none
7 GSM502377 Iron radula rep3 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
unclassified source_name:Pooled iron depositing radula sac tissue title:Iron radula rep3 description:none
8 GSM502378 Iron radula rep4 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
unclassified source_name:Pooled iron depositing radula sac tissue title:Iron radula rep4 description:none
9 GSM502379 Calcium radula rep1 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
unclassified source_name:Pooled calcium depositing radula sac tissue title:Calcium radula rep1 description:none
10 GSM502380 Calcium radula rep2 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
unclassified source_name:Pooled calcium depositing radula sac tissue title:Calcium radula rep2 description:none
11 GSM502381 Calcium radula rep3 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
unclassified source_name:Pooled calcium depositing radula sac tissue title:Calcium radula rep3 description:none
12 GSM502382 Calcium radula rep4 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
unclassified source_name:Pooled calcium depositing radula sac tissue title:Calcium radula rep4 description:none
13 GSM502383 Foot muscle rep1 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
muscle Pooled foot muscle sac tissue
14 GSM502384 Foot muscle rep2 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
muscle Pooled foot muscle sac tissue
15 GSM502385 Foot muscle rep3 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
muscle Pooled foot muscle sac tissue
16 GSM502386 Foot muscle rep4 2,240 Queensland University of Technology 2010-01-29 [Oligo Array] Chiton 4x2K array (GPL9992) RNA Acanthopleura hirtosa
Acanthopleura hirtosa
muscle Pooled foot muscle sac tissue
17 GSM580628 Acrobeloides sp. (isolate KS586) 0 Kansas State University, Ecological Genomics Institute 2010-08-17 [Tiling Array] [Ce25b_MR] Affymetrix C. elegans Tiling 1.0R Array (GPL5634) genomic Acrobeloides sp. MAH-2010
Acrobeloides sp. MAH-2010
unclassified source_name:Genomic DNA from Acrobeloides sp. (isolate KS586) title:Acrobeloides sp. (isolate KS586) description:CEL files contain raw intensity data, without scaling or smoothing
18 GSM915436 Apal_G3-Acer x Apal 3 12,550 King Abdullah University of Science and Technology 2012-04-16 [cDNA Array] UCM_Apal_12550_G3_Acer subset (GPL15443) genomic Acropora cervicornis,Acropora palmata
Acropora cervicornis,Acropora palmata
unclassified source_name:Acer Cy3 Apal Cy5 title:Apal_G3-Acer x Apal 3
19 GSM915437 Apal_G3-Acer x Apal 4 12,550 King Abdullah University of Science and Technology 2012-04-16 [cDNA Array] UCM_Apal_12550_G3_Acer subset (GPL15443) genomic Acropora cervicornis,Acropora palmata
Acropora cervicornis,Acropora palmata
unclassified source_name:Acer Cy3 Apal Cy5 title:Apal_G3-Acer x Apal 4
20 GSM1017247 Day 4 Control Replicate 1 18,432 Florida International University 2012-10-09 [cDNA Array] Australian National University Acropora millepora 18k array version 1 (GPL6941) RNA Acropora millepora
Acropora millepora
unclassified source_name:Control Treatment, Day 4 (ambient temperature) pooled RNA from all treatments and time points title:Day 4 Control Replicate 1 description:The reference sample consisted of pooled RNA from all treatments and time points.
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