Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(17,392)

Invertebrates
(1,567)

Phages
(0)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(0)

HT-Seq
(121)

Other
(0)

All
(1,567)

muscular
(0)

liver
(0)

lung
(0)

urinary
(0)

endo/exo-crine
(5)

embryo
(114)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(78)

unclassified
(1,146)

all
(1,567)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM400372	ZFH1_E-0-12h	0	The University of Chicago	2009-05-06	[Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629)	genomic	Drosophila melanogaster	unclassified	source_name:ZFH1_E-0-12h input title:ZFH1_E-0-12h description:ZFH1_E-0-12h test: 84.CEL test: A1_ZFH1.CEL test: B1_ZFH1.CEL reference: B1_Mock.CEL reference: I.CEL reference: S_A1_Mock.CEL
2	GSM417014	YPT47_totalRNA_replicate3	72,014	UNC-Chapel Hill	2009-06-12	[Oligo Array] NimbleGen C. elegans 72K Expression Array 080128_worm170_modENCODE_expr (GPL8673)	RNA	Caenorhabditis elegans	embryo	mixed stage embryos from X;V fusion strain
3	GSM417013	YPT47_totalRNA_replicate2	72,014	UNC-Chapel Hill	2009-06-12	[Oligo Array] NimbleGen C. elegans 72K Expression Array 080128_worm170_modENCODE_expr (GPL8673)	RNA	Caenorhabditis elegans	embryo	mixed stage embryos from X;V fusion strain
4	GSM417012	YPT47_totalRNA_replicate1	72,014	UNC-Chapel Hill	2009-06-12	[Oligo Array] NimbleGen C. elegans 72K Expression Array 080128_worm170_modENCODE_expr (GPL8673)	RNA	Caenorhabditis elegans	embryo	mixed stage embryos from X;V fusion strain
5	GSM417011	YPT41_totalRNA_replicate3	72,014	UNC-Chapel Hill	2009-06-12	[Oligo Array] NimbleGen C. elegans 72K Expression Array 080128_worm170_modENCODE_expr (GPL8673)	RNA	Caenorhabditis elegans	embryo	mixed stage embryos from X;II fusion strain
6	GSM417010	YPT41_totalRNA_replicate2	72,014	UNC-Chapel Hill	2009-06-12	[Oligo Array] NimbleGen C. elegans 72K Expression Array 080128_worm170_modENCODE_expr (GPL8673)	RNA	Caenorhabditis elegans	embryo	mixed stage embryos from X;II fusion strain
7	GSM417009	YPT41_totalRNA_replicate1	72,014	UNC-Chapel Hill	2009-06-12	[Oligo Array] NimbleGen C. elegans 72K Expression Array 080128_worm170_modENCODE_expr (GPL8673)	RNA	Caenorhabditis elegans	embryo	mixed stage embryos from X;II fusion strain
8	GSM412185	xpa-1_2	22,625	University of Oslo	2009-06-03	[GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200)	RNA	Caenorhabditis elegans	unclassified	source_name:xpa-1 mutant title:xpa-1_2 description:xpa-2
9	GSM412184	xpa-1_1	22,625	University of Oslo	2009-06-03	[GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200)	RNA	Caenorhabditis elegans	unclassified	source_name:xpa-1 mutant title:xpa-1_1 description:xpa-1
10	GSM401803	WT_GFPp_rep3	22,625	Genentech, Inc.	2009-05-11	[GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200)	RNA	Caenorhabditis elegans	embryo	GFP+ cells, wild-type embryos
11	GSM401799	WT_GFPp_rep2	22,625	Genentech, Inc.	2009-05-11	[GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200)	RNA	Caenorhabditis elegans	embryo	GFP+ cells, wild-type embryos
12	GSM401795	WT_GFPp_rep1	22,625	Genentech, Inc.	2009-05-11	[GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200)	RNA	Caenorhabditis elegans	embryo	GFP+ cells, wild-type embryos
13	GSM401804	WT_GFPm_rep3	22,625	Genentech, Inc.	2009-05-11	[GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200)	RNA	Caenorhabditis elegans	embryo	GFP- cells from wild-type embryos
14	GSM401800	WT_GFPm_rep2	22,625	Genentech, Inc.	2009-05-11	[GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200)	RNA	Caenorhabditis elegans	embryo	GFP- cells from wild-type embryos
15	GSM401796	WT_GFPm_rep1	22,625	Genentech, Inc.	2009-05-11	[GeneChip] [Celegans] Affymetrix C. elegans Genome Array (GPL200)	RNA	Caenorhabditis elegans	embryo	GFP- cells from wild-type embryos
16	GSM409650	WPP + 24 hr (Celniker/RNA:342) extraction2_array1	0	Ontario Institute for Cancer Research	2009-05-28	[Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629)	RNA	Drosophila melanogaster	unclassified	source_name:WPP + 24 hr (Celniker/RNA:342) extraction2_array1 channel_1 title:WPP + 24 hr (Celniker/RNA:342) extraction2_array1 description:n/a
17	GSM409651	WPP + 24 hr (Celniker/RNA:340) extraction3_array1	0	Ontario Institute for Cancer Research	2009-05-28	[Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629)	RNA	Drosophila melanogaster	unclassified	source_name:WPP + 24 hr (Celniker/RNA:340) extraction3_array1 channel_1 title:WPP + 24 hr (Celniker/RNA:340) extraction3_array1 description:n/a
18	GSM409649	WPP + 24 hr (Celniker/RNA:338) extraction1_array1	0	Ontario Institute for Cancer Research	2009-05-28	[Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629)	RNA	Drosophila melanogaster	unclassified	source_name:WPP + 24 hr (Celniker/RNA:338) extraction1_array1 channel_1 title:WPP + 24 hr (Celniker/RNA:338) extraction1_array1 description:n/a
19	GSM398842	Wild_type_Drosophila_normoxia_sample6	18,952	University of Pennsylvania	2009-04-28	[GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322)	RNA	Drosophila melanogaster	unclassified	source_name:DmWT Nx # 6, normoxia, two weeks title:Wild_type_Drosophila_normoxia_sample6 description:Each sample was made using single whole fly.
20	GSM398841	Wild_type_Drosophila_normoxia_sample5	18,952	University of Pennsylvania	2009-04-28	[GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322)	RNA	Drosophila melanogaster	unclassified	source_name:DmWT Nx # 5, normoxia, two weeks title:Wild_type_Drosophila_normoxia_sample5 description:Each sample was made using single whole fly.

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