Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(19)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(547)
  Tiling Array
(1,153)
  cDNA Array
(493)
  Oligo Array
(950)
  Bead Array
(3)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(2)
  HT-Seq
(1,644)
  Other
(5)
  All
(4,819)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 A Transcriptomic Analysis of Land Use Impacts on the Oyster, Crassostrea virginica, in the South Atlantic Bight. (GSE14793) [cDNA Array] Hollings Marine Laboratory Crassostrea cDNA Array (GPL3994) Medical University South Carolina 2009-02-11 Crassostrea virginica
Crassostrea virginica
16,020,000
(30,000 x 534)
266 268 by_platform
by_series
2 Gene expression of metamorphosis in fire ants (GSE24906) [cDNA Array] UNIL_fireant_25K_vG_and_vI (GPL11109) University of Lausanne 2010-10-25 Solenopsis invicta
Solenopsis invicta
4,925,840
(18,380 x 268)
268 by_platform
by_series
3 Gene expression in Solenopsis invicta, Solenopsis richteri and hybrids (GSE35217) [cDNA Array] UNIL_fireant_25K_vE1.0 (GPL6930) Fondazione Edmund Mach 2012-01-19 Solenopsis invicta
Solenopsis invicta
3,548,160
(25,344 x 140)
140 by_platform
by_series
4 Time course microarray approach comparing the ectopic expression and loss-of-function of gcm to wildtype (GSE3257) [cDNA Array] Heidelberg FlyArray (GPL517) University of Mainz 2005-09-07 Drosophila melanogaster
Drosophila melanogaster
2,761,728
(47,616 x 58)
58 by_platform
by_series
5 Effects of ploidy and sex-locus genotype on gene expression patterns in the fire ant Solenopsis invicta (GSE42786) [cDNA Array] UNIL_fireant_25K_vE1.0 (GPL6930) University of Lausanne 2012-12-06 Solenopsis invicta
Solenopsis invicta
2,280,960
(25,344 x 90)
90 by_platform
by_series
6 Expression data from porcelain crabs following heat stress (GSE7498) [cDNA Array] Stillman Lab CrabChip01 (GPL4554) San Francisco State University 2007-04-11 Petrolisthes cinctipes
Petrolisthes cinctipes
2,267,136
(13,824 x 164)
2 162 by_platform
by_series
7 Starvation response in Drosophila and its implication for sex specific metabolism and aging (GSE1672) [cDNA Array] MJArray Fly (GPL1404) Forschungszentrum Karlsruhe 2004-08-11 Drosophila melanogaster
Drosophila melanogaster
2,044,224
(32,448 x 63)
63 by_platform
by_series
8 Life cycle of Drosophila melanogaster (GSE94) [cDNA Array] Drosophila_Life_Cycle (GPL218) Yale University School of Medicine 2002-11-19 Drosophila melanogaster
Drosophila melanogaster
2,001,492
(12,588 x 159)
24 60 75 by_platform
by_series
9 Comparison of fire ant adult queens with different supergene genotypes (SB/SB and SB/Sb) and different age classes (1-day-old virgins, 11-day-old virgins and reproductive queens) from 2008 and 2009 (GSE42062) [cDNA Array] UNIL_fireant_25K_vE1.0 (GPL6930) University of Lausanne 2012-11-06 Solenopsis invicta
Solenopsis invicta
1,976,832
(25,344 x 78)
78 by_platform
by_series
10 Transcriptome profiling of Pacific oyster Crassostrea gigas families that differ in tolerance of heat shock (GSE12070) [cDNA Array] Hollings Marine Laboratory Crassostrea cDNA Array (GPL3994) Medical University South Carolina 2008-07-10 Crassostrea gigas
Crassostrea gigas
1,800,000
(30,000 x 60)
60 by_platform
by_series
11 Global Transcriptional Responses to Cisplatin in Dictyostelium discoideum Identify Potential Drug Targets (GSE8287) [cDNA Array] BCM/Shaulsky Dictyostelium accent 16K v1.0 (GPL5382) Baylor college of medicine 2007-06-25 Dictyostelium discoideum
Dictyostelium discoideum
1,689,600
(16,896 x 100)
100 by_platform
by_series
12 Sex-biased gene expression (GSE442) [cDNA Array] Incyte Drosophila LifeArray v1.0 (GPL20) NIDDK, NIH 2003-06-02 Drosophila melanogaster
Drosophila melanogaster
1,447,344
(31,464 x 46)
14 32 by_platform
by_series
13 Global analysis of dauer gene expression in Caenorhabditis elegans (GSE3169) [cDNA Array] CE_printG_H_I (GPL2653) Stanford Microarray Database (SMD) 2005-08-19 Caenorhabditis elegans
Caenorhabditis elegans
1,440,768
(21,504 x 67)
67 by_platform
by_series
14 Gene expression analysis in Drosophila introgression hybrids (GSE44329) [cDNA Array] HartlLab Drosophilamelanogaster PCRproducts 22k (GPL6056) Indiana University 2013-02-14 Drosophila simulans
Drosophila simulans
1,375,168
(21,487 x 64)
64 by_platform
by_series
15 Colonization, luminescence, and autoinducer effects on host transcription during development of squid-vibrio association (GSE13533) [cDNA Array] UI Squid EST 30K cDNA array (GPL3825) The University of Iowa 2008-11-08 Euprymna scolopes
Euprymna scolopes
1,350,000
(30,000 x 45)
45 by_platform
by_series
16 Developmental time-course study of Drosophila melanogaster, D. sechellia, D. simulans, and D. sim x D.s sec hybrids (GSE17535) [cDNA Array] CDMC_Drosophila_12k2 (GPL3598) McMaster University 2009-08-06 Drosophila melanogaster
Drosophila melanogaster
1,327,104
(27,648 x 48)
48 by_platform
by_series
17 Circadian regulation of gene expression in the coral algal endosymbiosis (GSE21658) [cDNA Array] Australian National University Acropora millepora 18k array version 1 (GPL6941) Bar Ilan University 2010-05-04 Acropora millepora
Acropora millepora
1,327,104
(18,432 x 72)
72 by_platform
by_series
18 Drosophila melanogaster developmental timecourse: wild type, eve, ftz (GSE14086) [cDNA Array] Dmel_arrayplatform (GPL248) University of Chicago 2008-12-22 Drosophila melanogaster
Drosophila melanogaster
1,260,000
(20,000 x 63)
63 by_platform
by_series
19 D. simulans with variable Y chromosomes (GSE43665) [cDNA Array] HartlLab Drosophilamelanogaster PCRproducts 22k (GPL6056) Harvard School of Public Health 2013-01-22 Drosophila simulans
Drosophila simulans
1,246,246
(21,487 x 58)
58 by_platform
by_series
20 Gene expression variation in African and European populations of Drosophila melanogaster (GSE8843) [cDNA Array] DGRC-D. melanogaster-DGRC1-15552-v5 (GPL3830) University of Munich 2007-08-22 Drosophila melanogaster
Drosophila melanogaster
1,244,160
(15,552 x 80)
80 by_platform
by_series
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