Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(13)		   SAGE RsaI
(0)		   SAGE Sau3A
(1)		   MPSS
(0)		   GeneChip
(274)		   Tiling Array
(10)		   cDNA Array
(146)		   Oligo Array
(227)		   Bead Array
(5)		   Protein Array
(1)		   Antibody
(0)		   RT-PCR
(5)		   HT-Seq
(70)		   Other
(2)		   All
(754)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Comparative Placental Efficiency in Swine Examined Using Expression Profiling (GSE10441) [GeneChip] Affymetrix GeneChip Porcine Genome Array probe-level (GPL6472) North Carolina State University 2008-02-07 Sus scrofa
Sus scrofa domestica		 7,969,050
(265,635 x 30) 		30 by_platform
by_series
2 Tissue-Specific Transcriptional Profiling of Epigenetic Asymmetry in Porcine Parthenogenetic Fetuses1 (GSE10443) [GeneChip] Affymetrix GeneChip Porcine Genome Array probe-level (GPL6472) North Carolina State University 2008-02-07 Sus scrofa
Sus scrofa domestica		 6,375,240
(265,635 x 24) 		5 8 6 5 by_platform
by_series
3 Gene expression data from muscle sample of pig commercial herd Pix(DLxDE). (GSE32112) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Leibniz Institute for Farm Animal Biology (FBN) 2011-09-14 Sus scrofa
Sus scrofa domestica		 4,993,461
(24,123 x 207) 		207 by_platform
by_series
4 Gene expression data from liver sample of pig commercial herd Pix(DLxDE). (GSE25445) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Leibniz Institute for Farm Animal Biology (FBN) 2010-11-17 Sus scrofa
Sus scrofa domestica		 3,618,450
(24,123 x 150) 		150 by_platform
by_series
5 Fetal programming of hepatic transcriptome in response to gestational dietary protein levels in the pig (GSE25484) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Leibniz Institute for Farm Animal Biology (FBN) 2010-11-18 Sus scrofa
Sus scrofa domestica		 2,967,129
(24,123 x 123) 		123 by_platform
by_series
6 Gene Expression Analysis of Deer Antler (GSE20036) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Hospital Nacional de Parapléjicos (SESCAM) 2010-01-25 Cervus elaphus
Cervus elaphus		 2,624,400
(54,675 x 48) 		24 24 by_platform
by_series
7 Host cells infected by various types of viruses (GSE31524) [GeneChip] [Canine_2] Affymetrix Canine Genome 2.0 Array (GPL3738) Nanyang Technological University 2011-08-18 Canis lupus familiaris
Canis lupus familiaris		 2,582,100
(43,035 x 60) 		60 by_platform
by_series
8 Comparative Expression Profiling of E. coli and S. aureus inoculated primary Mammary Gland Cells sampled from Cows with different genetic Predisposition for Somatic Cell Score (GSE24560) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) Leibniz Institute of Farm Animal Biology 2010-10-06 Bos taurus
Bos taurus		 2,123,264
(24,128 x 88) 		88 by_platform
by_series
9 Effects of ad libitum feeding on canine subcutaneous adipose tissue gene expression (GSE24099) [GeneChip] [Canine_2] Affymetrix Canine Genome 2.0 Array (GPL3738) University of Illinois 2010-09-13 Canis lupus familiaris
Canis lupus familiaris		 1,936,575
(43,035 x 45) 		45 by_platform
by_series
10 Impact of breed and sex on porcine endocrine transcriptome: A Bayesian biometrical analysis (GSE14739) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Universitat Autonoma Barcelona 2009-02-06 Sus scrofa
Sus scrofa domestica		 1,929,840
(24,123 x 80) 		16 16 16 32 by_platform
by_series
11 Effects of pregnancy and progesterone supplementation on endometrial gene expression in cattle (GSE33030) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) University College Dublin, Ireland 2011-10-18 Bos taurus
Bos taurus		 1,906,112
(24,128 x 79) 		79 by_platform
by_series
12 The gene expression response of spontaneous canine sarcomas to thermoradiotherapy – response heterogeneity and combination therapeutics (GSE23380) [GeneChip] [Canine_2] Affymetrix Canine Genome 2.0 Array (GPL3738) Duke University 2010-08-02 Canis lupus familiaris
Canis lupus familiaris		 1,893,540
(43,035 x 44) 		44 by_platform
by_series
13 Gene Expression Profiling Identifies Inflammation and Angiogenesis as Distinguishing Features of Canine Hemangiosarcoma (GSE23760) [GeneChip] [Canine_2] Affymetrix Canine Genome 2.0 Array (GPL3738) University of Colorado Denver 2010-08-23 Canis lupus familiaris
Canis lupus familiaris		 1,893,540
(43,035 x 44) 		39 5 by_platform
by_series
14 Early gene expression events in ferrets in response to SARS coronavirus infection versus direct interferon-alpha2b stimulation (GSE22581) [GeneChip] [Canine_2] Affymetrix Canine Genome 2.0 Array (GPL3738) Toronto General Research Institute 2010-06-25 Mustela putorius furo
Mustela putorius furo		 1,850,505
(43,035 x 43) 		22 21 by_platform
by_series
15 Gene expression data from Muscle Longissimus dorsi sample of F2 animals (GSE10204) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Leibniz Institute for Farm Animal Biology (FBN) 2008-01-18 Sus scrofa
Sus scrofa domestica		 1,785,102
(24,123 x 74) 		74 by_platform
by_series
16 Canine normal tissue gene expression profiles (GSE20113) [GeneChip] [Canine_2] Affymetrix Canine Genome 2.0 Array (GPL3738) National Cancer Institute 2010-01-29 Canis lupus familiaris
Canis lupus familiaris		 1,678,365
(43,035 x 39) 		4 8 8 4 4 4 4 3 by_platform
by_series
17 Gene Transcription Abnormalities in Canine Atopic Dermatitis (GSE39278) [GeneChip] [Canine_2] Affymetrix Canine Genome 2.0 Array (GPL3738) Mayo Clinic Rochester 2012-07-11 Canis lupus familiaris
Canis lupus familiaris		 1,678,365
(43,035 x 39) 		39 by_platform
by_series
18 Fetal programming of muscle transcriptome in response to gestational dietary protein levels in the pig (GSE33740) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Leibniz Institute for Farm Animal Biology (FBN) 2011-11-16 Sus scrofa
Sus scrofa domestica		 1,664,487
(24,123 x 69) 		69 by_platform
by_series
19 Muscle gene expression patterns in pigs with divergent phenotypes for fatness traits (GSE19275) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) IRTA 2009-12-02 Sus scrofa
Sus scrofa domestica		 1,640,364
(24,123 x 68) 		68 by_platform
by_series
20 A linear-mixed model approach to identify expressed SFPs using short oligo microarrays - Placenta vs. Fibroblast (GSE10446) [GeneChip] Affymetrix GeneChip Porcine Genome Array probe-level (GPL6472) North Carolina State University 2008-02-08 Sus scrofa
Sus scrofa domestica		 1,593,810
(265,635 x 6) 		3 3 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [14]
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