Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(375)
  Primates
(0)
  Rodents
(326)
  Mammals
(28)
  Vertebrates
(18)
  Invertebrates
(49)
  Plants
(116)
  Bacteria
(60)
  Viruses
(0)
  Phages
(0)
  Unclassified
(5)
  All
(978)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(8)
  Tiling Array
(0)
  cDNA Array
(8)
  Oligo Array
(10)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(2)
  Other
(0)
  All
(28)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Phenotype heterogeneity and maturation of alveolar macrophages in the domestic pig (GSE52705) [GeneChip] [SNOWBALLs520824F] Affymetrix Porcine Snowball Array (GPL16569) Institute for Molecular Bioscience 2013-11-25 Sus scrofa
Sus scrofa domestica
478,450
(47,845 x 10)
10 by_platform
by_series
2 The impact of breed genotype and tissue compartment on the response of pig macrophages to lipopolysaccharide (GSE45145) [GeneChip] [SNOWBALLs520824F] Affymetrix Porcine Snowball Array (GPL16569) Institute for Molecular Bioscience 2013-03-13 Sus scrofa
Sus scrofa domestica
6,698,300
(47,845 x 140)
140 by_platform
by_series
3 Expression data from pig BMDM treated with salmonella LPS (GSE30956) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Institute for Molecular Bioscience 2011-07-26 Sus scrofa
Sus scrofa domestica
554,829
(24,123 x 23)
23 by_platform
by_series
4 Sheep longissimus dorsi (LD) muscle from 40 individual progeny belonging to six Poll Dorset industry sires (GSE20552) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) CSIRO Livestock Industries 2010-02-26 Ovis aries
Ovis aries
965,120
(24,128 x 40)
40 by_platform
by_series
5 Expression data from Sheep longissimus dorsi (LD) muscle during development (GSE20112) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) CSIRO Livestock Industries 2010-01-29 Ovis aries
Ovis aries
361,920
(24,128 x 15)
15 by_platform
by_series
6 Microarray analysis of gene expression in the skin of tick-naïve and tick-infested Holstein-Friesian and Brahman cattle (GSE15342) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) University of Queensland 2009-03-23 Bos taurus
Bos taurus
289,536
(24,128 x 12)
12 by_platform
by_series
7 Peripheral WBC from Brahman and Holstein-Friesian cattle infested with the cattle tick Rhipicephalus microplus (GSE13725) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) University of Queensland 2008-11-24 Bos taurus
Bos taurus
144,768
(24,128 x 6)
6 by_platform
by_series
8 Expression data from Callipyge muscle types (ST, LD, SS, SM) at birth (T=0) and 12 weeks (T=12) (GSE5955) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) CSIRO Livestock Industries 2006-10-03 Ovis aries
Ovis aries
579,072
(24,128 x 24)
24 by_platform
by_series