Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(37)
  SAGE RsaI
(0)
  SAGE Sau3A
(2)
  MPSS
(0)
  GeneChip
(6,782)
  Tiling Array
(313)
  cDNA Array
(3,714)
  Oligo Array
(7,645)
  Bead Array
(1,151)
  Protein Array
(5)
  Antibody
(0)
  RT-PCR
(43)
  HT-Seq
(1,197)
  Other
(79)
  All
(20,968)
 
  brain
(100)
  blood
(1,247)
  connective
(501)
  reproductive
(495)
  muscular
(1,201)
  digestive
(235)
  liver
(883)
  lung
(242)
  urinary
(40)
  endo/exo-crine
(413)
  embryo
(184)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(76)
  unclassified
(1,165)
  all
(6,782)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM159397 Calf 129 gd T cells PBS 24,128 Montana State University 2007-01-30 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
pooled gd T cells derived from peripheral blood of calf 129 stimulated 4 hours with PBS
2 GSM159398 Calf 129 gd T cells MDP 24,128 Montana State University 2007-01-30 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
pooled gd T cells derived from peripheral blood of calf 129 stimulated 4 hours with MDP
3 GSM159399 Calf 150 gd T cells PBS 24,128 Montana State University 2007-01-30 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
pooled gd T cells derived from peripheral blood of calf 150 stimulated 4 hours with PBS
4 GSM159400 Calf 150 gd T cells MDP 24,128 Montana State University 2007-01-30 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
pooled gd T cells derived from peripheral blood of calf 150 stimulated 4 hours with MDP
5 GSM159401 Calf 151 gd T cells PBS 24,128 Montana State University 2007-01-30 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
pooled gd T cells derived from peripheral blood of calf 151 stimulated 4 hours with PBS
6 GSM159402 Calf 151 gd T cells MDP 24,128 Montana State University 2007-01-30 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
pooled gd T cells derived from peripheral blood of calf 151 stimulated 4 hours with MDP
7 GSM458778 MSC_day28_donor1 24,128 University of Pennsylvania 2009-10-02 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
pooled mesenchymal stem cells from bone marrow, chondrogenic, 28 days culture
8 GSM458779 MSC_day28_donor2 24,128 University of Pennsylvania 2009-10-02 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
pooled mesenchymal stem cells from bone marrow, chondrogenic, 28 days culture
9 GSM458785 MSC_day28_donor3 24,128 University of Pennsylvania 2009-10-02 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
pooled mesenchymal stem cells from bone marrow, chondrogenic, 28 days culture
10 GSM467928 MSC_d21_TGF 24,128 University of Pennsylvania 2009-11-03 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
pooled mesenchymal stem cells from bone marrow, chondrogenic, 21 days
11 GSM467930 MSC_d42_TGF 24,128 University of Pennsylvania 2009-11-03 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
pooled mesenchymal stem cells from bone marrow, chondrogenic, 42 days
12 GSM467931 MSC_d42_TGF_dynamic_loading 24,128 University of Pennsylvania 2009-11-03 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
pooled mesenchymal stem cells from bone marrow, chondrogenic, 42 days, dynamically loaded
13 GSM516461 LD_Sire_11_progeny_100 24,128 CSIRO Livestock Industries 2010-02-26 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Ovis aries
Ovis aries
pooled Gene expression data from LD muscle of a Poll Dorset sheep, progeny of sire 11, classified as High Estimated Breeding Value (EBV) for Eye Muscle Depth (EMD)
14 GSM516462 LD_Sire_11_progeny_101 24,128 CSIRO Livestock Industries 2010-02-26 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Ovis aries
Ovis aries
pooled Gene expression data from LD muscle of a Poll Dorset sheep, progeny of sire 11, classified as High Estimated Breeding Value (EBV) for Eye Muscle Depth (EMD)
15 GSM516463 LD_Sire_11_progeny_27 24,128 CSIRO Livestock Industries 2010-02-26 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Ovis aries
Ovis aries
pooled Gene expression data from LD muscle of a Poll Dorset sheep, progeny of sire 11, classified as High Estimated Breeding Value (EBV) for Eye Muscle Depth (EMD)
16 GSM516464 LD_Sire_11_progeny_35 24,128 CSIRO Livestock Industries 2010-02-26 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Ovis aries
Ovis aries
pooled Gene expression data from LD muscle of a Poll Dorset sheep, progeny of sire 11, classified as High Estimated Breeding Value (EBV) for Eye Muscle Depth (EMD)
17 GSM516465 LD_Sire_11_progeny_42 24,128 CSIRO Livestock Industries 2010-02-26 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Ovis aries
Ovis aries
pooled Gene expression data from LD muscle of a Poll Dorset sheep, progeny of sire 11, classified as High Estimated Breeding Value (EBV) for Eye Muscle Depth (EMD)
18 GSM516466 LD_Sire_11_progeny_51 24,128 CSIRO Livestock Industries 2010-02-26 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Ovis aries
Ovis aries
pooled Gene expression data from LD muscle of a Poll Dorset sheep, progeny of sire 11, classified as High Estimated Breeding Value (EBV) for Eye Muscle Depth (EMD)
19 GSM516467 LD_Sire_11_progeny_60 24,128 CSIRO Livestock Industries 2010-02-26 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Ovis aries
Ovis aries
pooled Gene expression data from LD muscle of a Poll Dorset sheep, progeny of sire 11, classified as High Estimated Breeding Value (EBV) for Eye Muscle Depth (EMD)
20 GSM516468 LD_Sire_11_progeny_91 24,128 CSIRO Livestock Industries 2010-02-26 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Ovis aries
Ovis aries
pooled Gene expression data from LD muscle of a Poll Dorset sheep, progeny of sire 11, classified as High Estimated Breeding Value (EBV) for Eye Muscle Depth (EMD)
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