Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(37)		   SAGE RsaI
(0)		   SAGE Sau3A
(2)		   MPSS
(0)		   GeneChip
(5,102)		   Tiling Array
(224)		   cDNA Array
(3,525)		   Oligo Array
(5,950)		   Bead Array
(559)		   Protein Array
(5)		   Antibody
(0)		   RT-PCR
(43)		   HT-Seq
(806)		   Other
(7)		   All
(16,260)		  
  brain
(99)		   blood
(787)		   connective
(391)		   reproductive
(436)		   muscular
(930)		   digestive
(163)		   liver
(683)		   lung
(176)		   urinary
(40)		   endo/exo-crine
(349)		   embryo
(160)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(76)		   unclassified
(812)		   all
(5,102)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM8880 Control 1 12,505 University of Pennsylvania 2003-08-06 [GeneChip] ToxExpress GeneChip Canine Array (GPL374) RNA Canis lupus familiaris
Canis lupus familiaris		 unclassified source_name:MDCK Cell Line title:Control 1 description:MDCK epithelial cells were grown on Transwell filters for four days. RNA was harvested and converted to cDNA and analyzed with the canine microarray described here.
2 GSM8881 Control 2 12,505 University of Pennsylvania 2003-08-06 [GeneChip] ToxExpress GeneChip Canine Array (GPL374) RNA Canis lupus familiaris
Canis lupus familiaris		 unclassified source_name:MDCK Cell Line title:Control 2 description:MDCK epithelial cells were grown on Transwell filters for four days. RNA was harvested and converted to cDNA and analyzed with the canine microarray described here.
3 GSM8882 Control 3 12,505 University of Pennsylvania 2003-08-06 [GeneChip] ToxExpress GeneChip Canine Array (GPL374) RNA Canis lupus familiaris
Canis lupus familiaris		 unclassified source_name:MDCK Cell Line title:Control 3 description:MDCK epithelial cells were grown on Transwell filters for four days. RNA was harvested and converted to cDNA and analyzed with the canine microarray described here.
4 GSM8883 3h HGF 1 12,505 University of Pennsylvania 2003-08-06 [GeneChip] ToxExpress GeneChip Canine Array (GPL374) RNA Canis lupus familiaris
Canis lupus familiaris		 unclassified source_name:MDCK Cell Line title:3h HGF 1 description:MDCK epithelial cells were grown on Transwell filters for four days. Cells were then treated with recombinant HGF for 3 hours. RNA was harvested and converted to cDNA and analyzed with the canine microarray described here.
5 GSM8884 3h HGF 2 12,505 University of Pennsylvania 2003-08-06 [GeneChip] ToxExpress GeneChip Canine Array (GPL374) RNA Canis lupus familiaris
Canis lupus familiaris		 unclassified source_name:MDCK Cell Line title:3h HGF 2 description:MDCK epithelial cells were grown on Transwell filters for four days. Cells were then treated with recombinant HGF for 3 hours. RNA was harvested and converted to cDNA and analyzed with the canine microarray described here.
6 GSM8885 3h HGF 3 12,505 University of Pennsylvania 2003-08-06 [GeneChip] ToxExpress GeneChip Canine Array (GPL374) RNA Canis lupus familiaris
Canis lupus familiaris		 unclassified source_name:MDCK cell line title:3h HGF 3 description:MDCK epithelial cells were grown on Transwell filters for four days. Cells were then treated with recombinant HGF for 3 hours. RNA was harvested and converted to cDNA and analyzed with the canine microarray described here.
7 GSM8886 24h HGF 1 12,505 University of Pennsylvania 2003-08-06 [GeneChip] ToxExpress GeneChip Canine Array (GPL374) RNA Canis lupus familiaris
Canis lupus familiaris		 unclassified source_name:MDCK Cell Line title:24h HGF 1 description:MDCK epithelial cells were grown on Transwell filters for four days. Cells were then treated with recombinant HGF for 24 hours. RNA was harvested and converted to cDNA and analyzed with the canine microarray described here.
8 GSM8887 24h HGF 2 12,505 University of Pennsylvania 2003-08-06 [GeneChip] ToxExpress GeneChip Canine Array (GPL374) RNA Canis lupus familiaris
Canis lupus familiaris		 unclassified source_name:MDCK Cell Line title:24h HGF 2 description:MDCK epithelial cells were grown on Transwell filters for four days. Cells were then treated with recombinant HGF for 24 hours. RNA was harvested and converted to cDNA and analyzed with the canine microarray described here.
9 GSM8888 24h HGF 3 12,505 University of Pennsylvania 2003-08-06 [GeneChip] ToxExpress GeneChip Canine Array (GPL374) RNA Canis lupus familiaris
Canis lupus familiaris		 unclassified source_name:MDCK Cell Line title:24h HGF 3 description:MDCK epithelial cells were grown on Transwell filters for four days. Cells were then treated with recombinant HGF for 24 hours. RNA was harvested and converted to cDNA and analyzed with the canine microarray described here.
10 GSM285799 Before LH surge, biological rep 1 24,128 Indian Institute of Science 2008-05-01 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bubalus bubalis
Bubalus bubalis		 unclassified source_name:Granulosa cells collected before LH surge from buffalo cows title:Before LH surge, biological rep 1 description:Probe level measurements were produced by robust multichip average (RMA) algorithm
11 GSM285808 Before LH surge, biological rep 2 24,128 Indian Institute of Science 2008-05-01 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bubalus bubalis
Bubalus bubalis		 unclassified source_name:Granulosa cells collected before LH surge from buffalo cows title:Before LH surge, biological rep 2 description:Probe level measurements were produced by robust multichip average (RMA) algorithm
12 GSM285812 Before LH surge, biological rep 3 24,128 Indian Institute of Science 2008-05-01 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bubalus bubalis
Bubalus bubalis		 unclassified source_name:Granulosa cells collected before LH surge from buffalo cows title:Before LH surge, biological rep 3 description:Probe level measurements were produced by robust multichip average (RMA) algorithm
13 GSM285814 1 h post LH surge, biological rep 1 24,128 Indian Institute of Science 2008-05-01 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bubalus bubalis
Bubalus bubalis		 unclassified source_name:Granulosa cells collected 1 h post LH surge from buffalo cows title:1 h post LH surge, biological rep 1 description:Probe level measurements were produced by robust multichip average (RMA) algorithm
14 GSM285815 1 h post LH surge, biological rep 2 24,128 Indian Institute of Science 2008-05-01 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bubalus bubalis
Bubalus bubalis		 unclassified source_name:Granulosa cells collected 1 h post LH surge from buffalo cows title:1 h post LH surge, biological rep 2 description:Probe level measurements were produced by robust multichip average (RMA) algorithm
15 GSM285818 1 h post LH surge, biological rep 3 24,128 Indian Institute of Science 2008-05-01 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bubalus bubalis
Bubalus bubalis		 unclassified source_name:Granulosa cells collected 1 h post LH surge from buffalo cows title:1 h post LH surge, biological rep 3 description:Probe level measurements were produced by robust multichip average (RMA) algorithm
16 GSM285824 22 h post LH surge, biological rep 1 24,128 Indian Institute of Science 2008-05-01 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bubalus bubalis
Bubalus bubalis		 unclassified source_name:Granulosa cells collected 22 h post LH surge from buffalo cows title:22 h post LH surge, biological rep 1 description:Probe level measurements produced by robust multichip average (RMA) algorithm
17 GSM285827 22 h post LH surge, biological rep 2 24,128 Indian Institute of Science 2008-05-01 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bubalus bubalis
Bubalus bubalis		 unclassified source_name:Granulosa cells collected 22 h post LH surge from buffalo cows title:22 h post LH surge, biological rep 2 description:Probe level measurements produced by robust multichip average (RMA) algorithm
18 GSM285831 22 h post LH surge, biological rep 3 24,128 Indian Institute of Science 2008-05-01 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bubalus bubalis
Bubalus bubalis		 unclassified source_name:Granulosa cells collected 22 h post LH surge from buffalo cows title:22 h post LH surge, biological rep 3 description:Probe level measurements produced by robust multichip average (RMA) algorithm
19 GSM289423 small_follicle_granulosa_cell_rep1 24,128 WSU 2008-05-19 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus		 unclassified source_name:granulosa cells of small follicles (< or = 5 mm) title:small_follicle_granulosa_cell_rep1 description:RNA from theca cell of small follicles
20 GSM289424 small_follicle_granulosa_cell_rep2 24,128 WSU 2008-05-19 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus		 unclassified source_name:granulosa cells of small follicles (< or = 5 mm) title:small_follicle_granulosa_cell_rep2 description:RNA from theca cell of small follicles
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