Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(1)
  MPSS
(0)
  GeneChip
(333)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(314)
  Bead Array
(0)
  Protein Array
(1)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(970)
 
1   |   2   |   3   |   4   |   5      »      [16]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Copy number variation in the porcine genome (GSE19047) [Oligo Array] NimbleGen agrsci porcine 2.1M v1 (GPL9664) Aarhus University, Faculty of Agricultural Sciences 2009-11-16 Sus scrofa
Sus scrofa domestica
102,881,808
(2,143,371 x 48)
48 by_platform
by_series
2 CGH analyses for the Chinese indigenous pig breeds and commercial pig breeds (GSE46847) [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) China Agriculture University 2013-05-11 Sus scrofa
Sus scrofa domestica
26,013,228
(2,167,769 x 12)
12 by_platform
by_series
3 Assessment of genome integrity with array CGH of cattle transgenic cell lines produced by homologous recombination and somatic cell cloning (GSE26132) [Oligo Array] NimbleGen Bos taurus UMD3.0 2.1M WG HD CGH (GPL11314) United States Department of Agriculture 2010-12-16 Bos taurus
Bos taurus
19,498,176
(2,166,464 x 9)
9 by_platform
by_series
4 DNA methylation profiles in the uterus during early pregnancy (GSE43501) [Oligo Array] Agilent-027994 DNZ/UoA_Bovine_~415k_v1 (GPL16270) DairyNZ Ltd 2013-01-15 Bos taurus
Bos taurus
18,409,952
(418,408 x 44)
44 by_platform
by_series
5 Analysis of copy number variations among diverse cattle breeds (GSE19866) [Oligo Array] NimbleGen Bos taurus Btau31 WG CGH (GPL9865) United States Department of Agriculture 2010-01-12 Bos taurus
Bos taurus
17,327,160
(385,048 x 45)
45 by_platform
by_series
6 Analysis of copy number variations among diverse cattle breeds (GSE19866) [Oligo Array] NimbleGen Bos taurus Btau40 WG CGH (GPL9866) United States Department of Agriculture 2010-01-12 Bos taurus
Bos taurus
17,281,125
(384,025 x 45)
45 by_platform
by_series
7 Identification of Copy Number Variants in Dogs (GSE36333) [Oligo Array] Agilent-027178 Dog Whole Ensembl Gene Array 2-2-2010 024881 (GPL15316) Texas A&M University 2012-03-07 Canis lupus familiaris
Canis lupus familiaris
13,028,928
(420,288 x 31)
1 30 by_platform
by_series
8 Copy number variation of individual cattle genomes using next-generation sequencing. (GSE31018) [Oligo Array] NimbleGen Bos taurus UMD3.0 2.1M WG HD CGH (GPL11314) United States Department of Agriculture 2011-07-28 Bos taurus
Bos taurus
10,832,320
(2,166,464 x 5)
5 by_platform
by_series
9 Genomic and epigenomic analysis of taurine and indicine cattle (GSE41624) [Oligo Array] Agilent-025320 Bovine Whole Genome Array 400K 9-8-09 (GPL16182) Texas A&M University 2012-10-16 Bos taurus
Bos taurus
10,086,912
(420,288 x 24)
24 by_platform
by_series
10 A Snapshot of Copy Number Variation in the pig genome (GSE10753) [Oligo Array] Nimblegen 385K pig array CGH (GPL6553) Aarhus University, Faculty of Agricultural Sciences 2008-03-06 Sus scrofa
Sus scrofa domestica
9,426,672
(392,778 x 24)
24 by_platform
by_series
11 Genome-wide CNVs within and between breeds (GSE26170) [Oligo Array] NimbleGen Dog 137K 12plex CGH array (090529_CanFam_TN_CGH) (GPL11333) University of Washington 2010-12-18 Canis lupus familiaris
Canis lupus familiaris
8,763,456
(136,929 x 64)
64 by_platform
by_series
12 Identification of global copy number variations among diverse pig breeds by a CGH array (GSE41488) [Oligo Array] NimbleGen pig CGH array (GPL16165) Huazhong Agricultural University 2012-10-10 Sus scrofa
Sus scrofa domestica
8,632,032
(719,336 x 12)
12 by_platform
by_series
13 Identification of copy number variants in horses (GSE32702) [Oligo Array] Agilent-027318 Horse_Whole_Genome_equCab2_Exon_Array V1 (GPL14675) Texas A&M University 2011-10-07 Equus caballus
Equus caballus
7,565,184
(420,288 x 18)
18 by_platform
by_series
14 Canine CNVs associated with canFam2 segmental duplications (GSE13266) [Oligo Array] Custom Nimblegen aCGH chip targeted to canFam2 segmental duplications. (GPL7501) University of Washington 2008-10-17 Canis lupus familiaris
Canis lupus familiaris
7,342,132
(386,428 x 19)
19 by_platform
by_series
15 De novo copy number variations in cloned dogs (Nimblegen) (GSE49092) [Oligo Array] IRCGP Canine 720K v1.0 (GPL17479) Catholic University of Korea 2013-07-22 Canis lupus familiaris
Canis lupus familiaris
6,474,510
(719,390 x 9)
9 by_platform
by_series
16 De novo copy number variations in cloned dogs (GSE49357) [Oligo Array] IRCGP Canine 720K v1.0 (GPL17479) Catholic University of Korea 2013-07-30 Canis lupus familiaris
Canis lupus familiaris
6,474,510
(719,390 x 9)
9 by_platform
by_series
17 Gene expression in Longissimus lumborum in pig using the GenmascqChip (custom 15K Agilent microarray) (GSE28714) [Oligo Array] [Agilent-019442] Agilent/INRA FH Sus scrofa 15K muscle array [Probe Name version] (GPL11445) INRA 2011-04-19 Sus scrofa
Sus scrofa domestica
4,942,600
(15,208 x 325)
325 by_platform
by_series
18 Transcriptional profiling of six normal Angus tissues (GSE23837) [Oligo Array] BOMC Bovine 25K v1.0 (GPL8813) University of Minnesota 2010-08-26 Bos taurus
Bos taurus
4,320,000
(30,000 x 144)
48 24 24 48 by_platform
by_series
19 FS001: Aberrant gene expression in dogs with portosystemic shunts (GSE39005) [Oligo Array] A-UMCU-C44K-1.0 (GPL15184) UMC Utrecht, Netherlands 2012-06-28 Canis lupus familiaris
Canis lupus familiaris
4,160,240
(45,220 x 92)
92 by_platform
by_series
20 The peripheral blood transcriptome reflects variations in immunity traits in swine: toward identification of biomarkers (GSE45196) [Oligo Array] SLA/Immune Response/NRSP8 Pig 70 mers Oligonucleotides 3.8K + 13.3K v1 (GPL7151) INRA 2013-03-15 Sus scrofa
Sus scrofa domestica
4,128,000
(19,200 x 215)
82 133 by_platform
by_series
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