Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(37)
  SAGE RsaI
(0)
  SAGE Sau3A
(2)
  MPSS
(0)
  GeneChip
(6,782)
  Tiling Array
(313)
  cDNA Array
(3,714)
  Oligo Array
(7,645)
  Bead Array
(1,151)
  Protein Array
(5)
  Antibody
(0)
  RT-PCR
(43)
  HT-Seq
(1,197)
  Other
(79)
  All
(20,968)
 
  brain
(182)
  blood
(1,417)
  connective
(381)
  reproductive
(347)
  muscular
(895)
  digestive
(498)
  liver
(287)
  lung
(241)
  urinary
(22)
  endo/exo-crine
(507)
  embryo
(230)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(437)
  unclassified
(2,201)
  all
(7,645)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM687459 Ventricle sin.-1 60,933 University of Padova 2011-03-09 [Oligo Array] CRIBI pig mRNA expression array [Ensembl (Ver. 56) and UniGene (Ver. 38)] (averaged probe version) (GPL13259) RNA Sus scrofa
Sus scrofa domestica
heart Ventricle sinistrum. Samples from 3 different pig were extracted and than pooled because pigs were not inbred.
2 GSM687460 Ventricle sin.-2 60,933 University of Padova 2011-03-09 [Oligo Array] CRIBI pig mRNA expression array [Ensembl (Ver. 56) and UniGene (Ver. 38)] (averaged probe version) (GPL13259) RNA Sus scrofa
Sus scrofa domestica
heart Ventricle sinistrum. Samples from 3 different pig were extracted and than pooled because pigs were not inbred.
3 GSM687461 Atrium sin.-1 60,933 University of Padova 2011-03-09 [Oligo Array] CRIBI pig mRNA expression array [Ensembl (Ver. 56) and UniGene (Ver. 38)] (averaged probe version) (GPL13259) RNA Sus scrofa
Sus scrofa domestica
heart Atrium sinistrum. Samples from 3 different pig were extracted and than pooled because pigs were not inbred.
4 GSM687462 Atrium sin.-2 60,933 University of Padova 2011-03-09 [Oligo Array] CRIBI pig mRNA expression array [Ensembl (Ver. 56) and UniGene (Ver. 38)] (averaged probe version) (GPL13259) RNA Sus scrofa
Sus scrofa domestica
heart Atrium sinistrum. Samples from 3 different pig were extracted and than pooled because pigs were not inbred.
5 GSM687465 Skel. Muscle-1 60,933 University of Padova 2011-03-09 [Oligo Array] CRIBI pig mRNA expression array [Ensembl (Ver. 56) and UniGene (Ver. 38)] (averaged probe version) (GPL13259) RNA Sus scrofa
Sus scrofa domestica
muscle Skeletal muscle. Samples from 3 different pig were extracted and than pooled because pigs were not inbred.
6 GSM687466 Skel. Muscle-2 60,933 University of Padova 2011-03-09 [Oligo Array] CRIBI pig mRNA expression array [Ensembl (Ver. 56) and UniGene (Ver. 38)] (averaged probe version) (GPL13259) RNA Sus scrofa
Sus scrofa domestica
muscle Skeletal muscle. Samples from 3 different pig were extracted and than pooled because pigs were not inbred.
7 GSM1156693 skeletalmuscle_RFIneg_20kg_rep1 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle, low-RFI, 20kg body weight
8 GSM1156694 skeletalmuscle_RFIneg_20kg_rep2 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle, low-RFI, 20kg body weight
9 GSM1156695 skeletalmuscle_RFIneg_20kg_rep3 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle, low-RFI, 20kg body weight
10 GSM1156696 skeletalmuscle_RFIneg_20kg_rep4 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle, low-RFI, 20kg body weight
11 GSM1156697 skeletalmuscle_RFIneg_20kg_rep5 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle, low-RFI, 20kg body weight
12 GSM1156698 skeletalmuscle_RFIneg_20kg_rep6 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle, low-RFI, 20kg body weight
13 GSM1156699 skeletalmuscle_RFIneg_20kg_rep7 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle, low-RFI, 20kg body weight
14 GSM1156700 skeletalmuscle_RFIpl_20kg_rep1 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle,high-RFI, 20kg body weight
15 GSM1156701 skeletalmuscle_RFIpl_20kg_rep2 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle,high-RFI, 20kg body weight
16 GSM1156702 skeletalmuscle_RFIpl_20kg_rep3 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle,high-RFI, 20kg body weight
17 GSM1156703 skeletalmuscle_RFIpl_20kg_rep4 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle,high-RFI, 20kg body weight
18 GSM1156704 skeletalmuscle_RFIpl_20kg_rep5 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle,high-RFI, 20kg body weight
19 GSM1156705 skeletalmuscle_RFIpl_20kg_rep6 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle,high-RFI, 20kg body weight
20 GSM1156706 skeletalmuscle_RFIpl_20kg_rep7 29,364 INRA 2013-06-10 [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) RNA Sus scrofa
Sus scrofa domestica
muscle skeletalmuscle,high-RFI, 20kg body weight
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