Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,625)		   Primates
(206)		   Rodents
(12,612)		   Mammals
(782)		   Vertebrates
(1,156)		   Invertebrates
(4,045)		   Plants
(6,642)		   Bacteria
(2,980)		   Viruses
(50)		   Phages
(4)		   Unclassified
(287)		   All
(47,440)		  
  SAGE NlaIII
(13)		   SAGE RsaI
(0)		   SAGE Sau3A
(1)		   MPSS
(0)		   GeneChip
(282)		   Tiling Array
(10)		   cDNA Array
(148)		   Oligo Array
(242)		   Bead Array
(5)		   Protein Array
(1)		   Antibody
(0)		   RT-PCR
(5)		   HT-Seq
(73)		   Other
(2)		   All
(782)		  
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Bovine Glomerular and Aortic Endothelial Cells (GSE110) [SAGE NlaIII] SAGE:10:NlaIII:Bos taurus (GPL223) Albert Einstein College of Medicine 2002-12-10 Bos taurus
Bos taurus		 230,368
(115,184 x 2) 		2 by_platform
by_series
2 Effect of bovine viral diarrhoea virus infection in Madin-Darby bovine kidney cells (GSE756) [SAGE NlaIII] SAGE:10:NlaIII:Bos taurus (GPL223) National Animal Disease Center 2003-10-17 Bos taurus
Bos taurus		 230,368
(115,184 x 2) 		2 by_platform
by_series
3 Molecular mechanisms in Day 11 and Day 12 pre-implantation porcine embryos (GSE1453) [SAGE NlaIII] SAGE:10:NlaIII:Sus scrofa (GPL1270) ANRI 2004-06-01 Sus scrofa
Sus scrofa domestica		 274,094
(137,047 x 2) 		2 by_platform
by_series
4 Global Gene Expression Profiling of Bovine Lymphocyte Populations (GSE2244) [SAGE NlaIII] SAGE:10:NlaIII:Bos taurus (GPL223) National Animal Disease Center 2005-02-04 Bos taurus
Bos taurus		 460,736
(115,184 x 4) 		4 by_platform
by_series
5 Granulosa cell gene expression profiling of bovine cohort, dominant and subordinate follicles (GSE2598) [SAGE NlaIII] SAGE:10:NlaIII:Bos taurus (GPL223) University of Glasgow 2005-04-29 Bos taurus
Bos taurus		 345,552
(115,184 x 3) 		3 by_platform
by_series
6 D11.5 Tubular Porcine Conceptus (GSE3875) [SAGE NlaIII] SAGE:10:NlaIII:Sus scrofa (GPL1270) ARS-USDA 2005-12-19 Sus scrofa
Sus scrofa domestica		 137,047
(137,047 x 1) 		1 by_platform
by_series
7 LongSAGE analysis in skeletal muscle at three prenatal stages in lean and obese pig breeds (GSE5494) [SAGE NlaIII] SAGE:17:NlaIII:Sus scrofa (GPL4061) Chinese Academy of Agricultural Sciences 2006-08-10 Sus scrofa
Sus scrofa domestica		 653,232
(108,872 x 6) 		6 by_platform
by_series
8 Comparison of Gene Expression from Day 6 In Vivo- and In Vitro-Produced Porcine Blastocysts (GSE5571) [SAGE NlaIII] SAGE:10:NlaIII:Sus scrofa (GPL1270) USDA-ARS 2006-08-22 Sus scrofa
Sus scrofa domestica		 274,094
(137,047 x 2) 		2 by_platform
by_series
9 SAGE: gene expression in pigs of two commercial lines at the 3 and 9 months og age (GSE6062) [SAGE NlaIII] SAGE:17:NlaIII:Sus scrofa (GPL4061) university of trieste 2006-10-18 Sus scrofa
Sus scrofa domestica		 435,488
(108,872 x 4) 		4 by_platform
by_series
10 Changes in transcription patterns in BoMac cells in response to PDD spirochetes (GSE6702) [SAGE NlaIII] SAGE:10:NlaIII:Bos taurus (GPL223) USDA, ARS, NADC 2007-01-10 Bos taurus
Bos taurus		 230,368
(115,184 x 2) 		2 by_platform
by_series
11 Gene expression changes in BVDV2-infected BL3 cells (GSE6704) [SAGE NlaIII] SAGE:10:NlaIII:Bos taurus (GPL223) National Animal Disease Center 2007-01-10 Bos taurus
Bos taurus		 230,368
(115,184 x 2) 		2 by_platform
by_series
12 Gene expression in bovine mammary gland in response to increased milking frequency as determined by microarray and SAGE (GSE9344) [SAGE NlaIII] SAGE:10:NlaIII:Bos taurus (GPL223) USDA-ARS, BARC 2007-10-16 Bos taurus
Bos taurus		 230,368
(115,184 x 2) 		2 by_platform
by_series
13 PRRSV-infection of porcine alveolar macrophages (GSE10346) [SAGE NlaIII] SAGE:10:NlaIII:Sus scrofa (GPL1270) National Animal Disease Center 2008-01-31 Sus scrofa
Sus scrofa domestica		 685,235
(137,047 x 5) 		4 1 by_platform
by_series
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