Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(304)		   Primates
(0)		   Rodents
(246)		   Mammals
(18)		   Vertebrates
(11)		   Invertebrates
(39)		   Plants
(97)		   Bacteria
(50)		   Viruses
(0)		   Phages
(0)		   Unclassified
(3)		   All
(769)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(5)		   Tiling Array
(0)		   cDNA Array
(8)		   Oligo Array
(4)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(1)		   Other
(0)		   All
(18)		  
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 The Transcriptional Landscape of Bovine Skeletal Muscle (GSE25554) [Oligo Array] Agilent-015354 Bovine Oligo Microarray (4x44K) (Feature Number version) (GPL7053) CSIRO 2010-11-23 Bos taurus
Bos taurus		 2,170,560
(45,220 x 48) 		48 by_platform
by_series
2 Bovine skeletal muscle gene network (GSE5659) [cDNA Array] Bovine muscle and adipose cDNA array2 (GPL4197) CSIRO 2006-08-28 Bos taurus
Bos taurus		 1,481,760
(21,168 x 70) 		70 by_platform
by_series
3 Bovine skeletal muscle gene network (GSE5659) [cDNA Array] Bovine muscle and adipose cDNA array1 (GPL4196) CSIRO 2006-08-28 Bos taurus
Bos taurus		 1,478,400
(19,200 x 77) 		15 23 39 by_platform
by_series
4 Gene expression study of bovine skeletal muscle (GSE25005) [Oligo Array] Agilent-015354 Bovine Oligo Microarray (4x44K) (Probe Name version) (GPL9712) CSIRO 2010-10-28 Bos indicus
Bos indicus		 1,033,728
(21,536 x 48) 		48 by_platform
by_series
5 Sheep longissimus dorsi (LD) muscle from 40 individual progeny belonging to six Poll Dorset industry sires (GSE20552) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) CSIRO Livestock Industries 2010-02-26 Ovis aries
Ovis aries		 965,120
(24,128 x 40) 		40 by_platform
by_series
6 Transcription profiling of horned and polled and scurs cattle (GSE21585) [Oligo Array] Agilent-015354 Bovine Oligo Microarray (4x44K) (Feature Number version) (GPL7053) CSIRO 2010-04-29 Bos taurus
Bos taurus		 904,400
(45,220 x 20) 		20 by_platform
by_series
7 FBLN1 and FABP4 are drivers of resistance to fleece rot in Australian Merino sheep (GSE21022) [cDNA Array] Ovine-Bovine 12K cDNA array (GPL10240) CSIRO 2010-03-23 Ovis aries
Ovis aries		 752,928
(24,288 x 31) 		31 by_platform
by_series
8 Response of bovine mammary tissue to experimental Staphylococcus aureus infection (GSE9685) [cDNA Array] CLI Bovine innnate immune array (GPL6082) CSIRO 2007-11-26 Bos taurus
Bos taurus		 623,808
(17,328 x 36) 		36 by_platform
by_series
9 Expression data from Callipyge muscle types (ST, LD, SS, SM) at birth (T=0) and 12 weeks (T=12) (GSE5955) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) CSIRO Livestock Industries 2006-10-03 Ovis aries
Ovis aries		 579,072
(24,128 x 24) 		24 by_platform
by_series
10 Regulatory and epistatic networks unravel the complexity of piebald, a pigmentation phenotype in Merino sheep (GSE24189) [cDNA Array] Ovine-Bovine 12K cDNA array (GPL10240) CSIRO 2010-09-17 Ovis aries
Ovis aries		 485,760
(24,288 x 20) 		20 by_platform
by_series
11 Inferring the in vivo cellular program of developing bovine muscle from expression data (GSE44030) [Oligo Array] Agilent-015354 Bovine Oligo Microarray (4x44K) (Probe Name version) (GPL9712) CSIRO 2013-02-02 Bos taurus
Bos taurus		 430,720
(21,536 x 20) 		20 by_platform
by_series
12 Expression data from Sheep longissimus dorsi (LD) muscle during development (GSE20112) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) CSIRO Livestock Industries 2010-01-29 Ovis aries
Ovis aries		 361,920
(24,128 x 15) 		15 by_platform
by_series
13 Microarray analysis of gene expression in the skin of tick-naïve and tick-infested Holstein-Friesian and Brahman cattle (GSE15342) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) University of Queensland 2009-03-23 Bos taurus
Bos taurus		 289,536
(24,128 x 12) 		12 by_platform
by_series
14 Response of bovine mammary tissue to experimental Staphylococcus aureus infection experiment 1. (GSE9628) [cDNA Array] CLI Bovine innnate immune array (GPL6082) CSIRO 2007-11-16 Bos taurus
Bos taurus		 207,936
(17,328 x 12) 		12 by_platform
by_series
15 Response of bovine mammary tissue to experimental Staphylococcus aureus infection experiment 2. (GSE9680) [cDNA Array] CLI Bovine innnate immune array (GPL6082) CSIRO 2007-11-26 Bos taurus
Bos taurus		 207,936
(17,328 x 12) 		12 by_platform
by_series
16 Response of bovine mammary tissue to experimental Staphylococcus aureus infection experiment 3. (GSE9681) [cDNA Array] CLI Bovine innnate immune array (GPL6082) CSIRO 2007-11-26 Bos taurus
Bos taurus		 207,936
(17,328 x 12) 		12 by_platform
by_series
17 Peripheral WBC from Brahman and Holstein-Friesian cattle infested with the cattle tick Rhipicephalus microplus (GSE13725) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) University of Queensland 2008-11-24 Bos taurus
Bos taurus		 144,768
(24,128 x 6) 		6 by_platform
by_series
18 Small regulatory RNA in the bovine genome (GSE15450) [HT Sequencing] Illumina Genome Analyzer (Bos taurus) (GPL9323) University of Queensland 2009-03-30 Bos taurus
Bos taurus		 3
(0 x 3) 		3 by_platform
by_series
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