Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(279)
  Primates
(0)
  Rodents
(126)
  Mammals
(16)
  Vertebrates
(9)
  Invertebrates
(19)
  Plants
(87)
  Bacteria
(50)
  Viruses
(0)
  Phages
(0)
  Unclassified
(6)
  All
(592)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(6)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(6)
  Bead Array
(2)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(2)
  Other
(0)
  All
(16)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 De novo copy number variations in cloned dogs (Nimblegen) (GSE49092) [Oligo Array] IRCGP Canine 720K v1.0 (GPL17479) Catholic University of Korea 2013-07-22 Canis lupus familiaris
Canis lupus familiaris
6,474,510
(719,390 x 9)
9 by_platform
by_series
2 De novo copy number variations in cloned dogs (GSE49357) [Oligo Array] IRCGP Canine 720K v1.0 (GPL17479) Catholic University of Korea 2013-07-30 Canis lupus familiaris
Canis lupus familiaris
6,474,510
(719,390 x 9)
9 by_platform
by_series
3 De novo copy number variations in cloned dogs (Illumina SNP) (GSE49123) [Bead Array] Illumina CanineHD BeadChip (GPL17481) Catholic University of Korea 2013-07-23 Canis lupus familiaris
Canis lupus familiaris
1,389,296
(173,662 x 8)
8 by_platform
by_series
4 De novo copy number variations in cloned dogs (GSE49357) [Bead Array] Illumina CanineHD BeadChip (GPL17481) Catholic University of Korea 2013-07-30 Canis lupus familiaris
Canis lupus familiaris
1,389,296
(173,662 x 8)
8 by_platform
by_series
5 Effects of dietary fat types on growth performance, pork quality, and gene expression in growing-finishing pigs (GSE38146) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) National Institute of Animal Science 2012-05-22 Sus scrofa
Sus scrofa domestica
578,952
(24,123 x 24)
24 by_platform
by_series
6 Transcriptomes from Longissimus dorsi samples of Korean Native Cattle (Hanwoo) (GSE9256) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) Korea University 2007-10-07 Bos taurus
Bos taurus
241,280
(24,128 x 10)
10 by_platform
by_series
7 Comparison between skeletal transcriptomes of Korean native pig and Yorkshire (GSE18653) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Korea University 2009-10-20 Sus scrofa
Sus scrofa domestica
192,984
(24,123 x 8)
8 by_platform
by_series
8 Comparison between liver transcriptomes of Korean native pig and Yorkshire (GSE21408) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Korea University 2010-04-20 Sus scrofa
Sus scrofa domestica
192,984
(24,123 x 8)
8 by_platform
by_series
9 KNP_vs_YS_Fat (GSE9333) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Korea University 2007-10-16 Sus scrofa
Sus scrofa domestica
192,984
(24,123 x 8)
8 by_platform
by_series
10 The Severe Pathogenicity of Infected Ferrets Depleted of Alveolar Macrophages with 2009 Pandemic H1N1 Influenza Virus (GSE43813) [Oligo Array] Agilent-021193 Canine (V2) Gene Expression Microarray (ProbeName version) (GPL15379) Chungnam national university 2013-01-28 Mustela putorius
Mustela putorius
130,989
(43,663 x 3)
2 1 by_platform
by_series
11 Transcriptome changes following castration of Korean cattle bulls in longissimus dorsi muscle (GSE35085) [Oligo Array] Customized CombiMatrix Eukaryotic 12K (GPL15126) chonnam university 2012-01-13 Bos taurus
Bos taurus
112,896
(12,544 x 9)
9 by_platform
by_series
12 Bovine nose tissues: Yellow nose vs. Black nose (GSE53657) [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Probe Name version) (GPL11649) Hankyong national university 2013-12-26 Bos taurus
Bos taurus
87,426
(43,713 x 2)
2 by_platform
by_series
13 H3N2 canine influenza virus causes severe clinical signs in dogs with induction of genes related to inflammation and apoptosis (GSE44545) [Oligo Array] Agilent-021193 Canine (V2) Gene Expression Microarray (ProbeName version) (GPL15379) Chungnam national university 2013-02-21 Canis lupus familiaris
Canis lupus familiaris
87,326
(43,663 x 2)
2 by_platform
by_series
14 Expression data from porcine embryonic stem cells (GSE32506) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Seoul National University 2011-09-30 Sus scrofa
Sus scrofa domestica
72,369
(24,123 x 3)
3 by_platform
by_series
15 Comparative transcriptome analysis of various adipose depots in Hanwoo (GSE39618) [HT Sequencing] Illumina HiSeq 2000 (Bos taurus) (GPL15749) Seoul National University 2012-07-24 Bos taurus
Bos taurus
35
(0 x 35)
27 8 by_platform
by_series
16 Whole transcriptome analyses of six thoroughbred horses before and after exercising using RNA-Seq (GSE37870) [HT Sequencing] Illumina HiSeq 2000 (Equus caballus) (GPL15545) Seoul National University 2012-05-09 Equus caballus
Equus caballus
24
(0 x 24)
12 12 by_platform
by_series