Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(58)
  Primates
(1)
  Rodents
(35)
  Mammals
(9)
  Vertebrates
(10)
  Invertebrates
(18)
  Plants
(42)
  Bacteria
(57)
  Viruses
(2)
  Phages
(1)
  Unclassified
(15)
  All
(249)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(2)
  Oligo Array
(7)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(9)
 
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL17150 NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] 2,167,769 China Agriculture University 2013-05-11 NimbleGen Sus scrofa
Sus scrofa domestica
Oligo Array in situ oligonucleotide, NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1], Annotation in this record based on NCBI Sscrofa 10.2 2.1M probes in total
2 GPL16283 Agilent-028803 Custom Whole Sheep Genome Oligo Microarray 43,525 Institute of Preventive Veterinary Medicine 2012-11-14 Agilent Technologies Ovis aries
Ovis aries
Oligo Array in situ oligonucleotide, Agilent-028803 Custom Whole Sheep Genome Oligo Microarray,
3 GPL13968 Swine Protein-Annotated Oligonucleotide Microarray, 20K 32,448 Huazhong agricultural university, State Key Laboratory of Agricultural Microbiology 2011-07-25 Illumina (Oligo synthesis); University of Arizona (Array printing) Sus scrofa
Sus scrofa domestica
Oligo Array spotted oligonucleotide, Swine Protein-Annotated Oligonucleotide Microarray, 20K,
4 GPL14853 NimbleGen_Sus scrofa_135K array 23,806 Nanjing Agricultural University 2011-11-07 NimbleGen Sus scrofa
Sus scrofa domestica
Oligo Array in situ oligonucleotide, NimbleGen_Sus scrofa_135K array, Each probe is replicated 3 times. The design includes random GC and other control probes.
5 GPL5374 NLI_SSC_11.5K_cDNA_V1 11,520 China Agricultural University 2007-06-10 China Agricultural University Sus scrofa
Sus scrofa domestica
cDNA Array spotted DNA/cDNA, NLI_SSC_11.5K_cDNA_V1,
6 GPL13263 Wistar Institute Ursus americanus 9.6 k BA02 9,600 Shanghai institute for biology science 2011-03-10 Wistar Institute Ursus americanus
Ursus americanus
cDNA Array spotted DNA/cDNA, Wistar Institute Ursus americanus 9.6 k BA02, All our EST's for the array are submitted to National Center for Biotechnology Information (NCBI), http://www.ncbi.nlm.nih.gov/nucest (GW276093-GW314849)
7 GPL15885 LC Sciences Sus scrofa BST_miRPig_15 742 Capital Medical University School of Stomatology 2012-08-02 LC Sciences Sus scrofa
Sus scrofa domestica
Oligo Array in situ oligonucleotide, LC Sciences Sus scrofa BST_miRPig_15, Part No.: MRA-2001 Name: Pig miRNA Array Version No.: miRPig_15_BST_100720 No. of Unique Pig Probes: 188; No. of Repeats: 4 Based on Sanger miRBase Release 15.
8 GPL5171 Pork Quality Operon 70-mer oligo array 656 Sichuan Agricultural University 2007-05-17 Oligos:Qiagen-Operon, Printed by: National Engineering Center for Biochip(Shanghai,China) Sus scrofa
Sus scrofa domestica
Oligo Array spotted oligonucleotide, Pork Quality Operon 70-mer oligo array,
9 GPL14852 LC sciences pig microRNA 236 V16.0 336 Nanjing Agricultural University 2011-11-07 LC sciences Sus scrofa
Sus scrofa domestica
Oligo Array in situ oligonucleotide, LC sciences pig microRNA 236 V16.0,