Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(633)
  Primates
(7)
  Rodents
(405)
  Mammals
(90)
  Vertebrates
(62)
  Invertebrates
(84)
  Plants
(653)
  Bacteria
(92)
  Viruses
(2)
  Phages
(0)
  Unclassified
(12)
  All
(2,046)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(1)
  MPSS
(0)
  GeneChip
(6)
  Tiling Array
(0)
  cDNA Array
(29)
  Oligo Array
(50)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(4)
  Other
(0)
  All
(90)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Gene expression in Longissimus lumborum in pig using the GenmascqChip (custom 15K Agilent microarray) (GSE28714) [Oligo Array] [Agilent-019442] Agilent/INRA FH Sus scrofa 15K muscle array [Probe Name version] (GPL11445) INRA 2011-04-19 Sus scrofa
Sus scrofa domestica
4,942,600
(15,208 x 325)
325 by_platform
by_series
2 The peripheral blood transcriptome reflects variations in immunity traits in swine: toward identification of biomarkers (GSE45196) [Oligo Array] SLA/Immune Response/NRSP8 Pig 70 mers Oligonucleotides 3.8K + 13.3K v1 (GPL7151) INRA 2013-03-15 Sus scrofa
Sus scrofa domestica
4,128,000
(19,200 x 215)
82 133 by_platform
by_series
3 Gene expression in Longissimus lumborum and Semimembranosus skeletal muscles in pig using the GenmascqChip (custom 15K Agilent microarray) (GSE33957) [Oligo Array] [Agilent-019442] Agilent/INRA FH Sus scrofa 15K muscle array [Probe Name version] (GPL11445) INRA 2011-11-26 Sus scrofa
Sus scrofa domestica
2,737,440
(15,208 x 180)
180 by_platform
by_series
4 Molecular and functional features demarcate embryonic and induced pluripotent stem cells in rabbits (GSE43403) [Oligo Array] Agilent-037293 rabbit_BDR [Probe name version] (GPL16482) INRA 2013-01-10 Oryctolagus cuniculus
Oryctolagus cuniculus
2,166,852
(40,884 x 53)
53 by_platform
by_series
5 Comparisons of caruncles, intercaruncles, AI, IVF-ET and SCNT in pregnancies (GSE14638) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2009-01-29 Bos taurus
Bos taurus
2,045,952
(27,648 x 74)
74 by_platform
by_series
6 Gene expression profiling of mammary epithelial cells and their role in the predisposition to Staphylococcus aureus infections (GSE30390) [Oligo Array] Agilent-019921 Sheep Gene Expression Microarray (Feature Number version) (GPL10427) INRA 2011-07-05 Ovis aries
Ovis aries
1,857,792
(15,744 x 118)
118 by_platform
by_series
7 Time-course analysis of intestinal postnatal response to IUGR at 0-2 and 5 days (GSE15384) [Oligo Array] Swine Protein-Annotated Oligonucleotide Microarray (GPL7435) National Institute for Agronomical Research (INRA) 2009-03-25 Sus scrofa
Sus scrofa domestica
1,368,576
(20,736 x 66)
66 by_platform
by_series
8 AI versus IVF-ET & AI versus SCNT (GSE14050) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2008-12-19 Bos taurus
Bos taurus
1,216,512
(27,648 x 44)
44 by_platform
by_series
9 Intramuscular fat variability in pigs (GSE10759) [Oligo Array] INSERM MWG human 23k oligo array_version 3 (GPL6398) INRA 2008-03-07 Sus scrofa
Sus scrofa domestica
1,112,832
(23,184 x 48)
48 by_platform
by_series
10 Effect of selection on residual feed intake on gene expression in porcine liver (115 kg body weight) (GSE47767) [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) INRA 2013-06-10 Sus scrofa
Sus scrofa domestica
1,085,280
(45,220 x 24)
24 by_platform
by_series
11 Effect of selection on residual feed intake on gene expression in pig subcutaneous adipose tissue (115 kg body weight) (GSE47771) [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) INRA 2013-06-10 Sus scrofa
Sus scrofa domestica
1,085,280
(45,220 x 24)
24 by_platform
by_series
12 Identification of novel markers of beef sensory quality and muscle growth potential (GSE5561) [Oligo Array] Genopole Mouse oligo array from MWG version 1 (GPL4048) INRA 2006-08-18 Bos taurus
Bos taurus
1,072,512
(19,152 x 56)
56 by_platform
by_series
13 Effect of selection on residual feed intake on gene expression in porcine skeletal muscle (115 kg body weight) (GSE47769) [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) INRA 2013-06-10 Sus scrofa
Sus scrofa domestica
1,040,060
(45,220 x 23)
23 by_platform
by_series
14 Cycle versus Pregnancy (GSE13664) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2008-11-19 Bos taurus
Bos taurus
995,328
(27,648 x 36)
36 by_platform
by_series
15 Identification of novel markers of beef sensory quality and muscle growth potential (GSE5561) [Oligo Array] Mouse oligo array from MWG version 2 (GPL4049) INRA 2006-08-18 Bos taurus
Bos taurus
975,744
(22,176 x 44)
44 by_platform
by_series
16 The adult boar testicular and epididymal transcriptomes (GSE15614) [cDNA Array] AGENAE_PigGeneric2_9216 (GPL3729) INRA 2009-04-09 Sus scrofa
Sus scrofa domestica
884,736
(9,216 x 96)
48 48 by_platform
by_series
17 Comparison between caruncles and intercaruncles in AI, IVF-ET and SCNT pregnancies (GSE14047) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2008-12-19 Bos taurus
Bos taurus
829,440
(27,648 x 30)
30 by_platform
by_series
18 Pig Longissimus muscle in Basque and Large White pigs reared in 3 different rearing systems (GSE33958) [Oligo Array] [Agilent-019442] Agilent/INRA FH Sus scrofa 15K muscle array [Probe Name version] (GPL11445) INRA 2011-11-26 Sus scrofa
Sus scrofa domestica
760,400
(15,208 x 50)
50 by_platform
by_series
19 Effect of selection on residual feed intake on gene expression in porcine liver (20 kg body weight) (GSE47717) [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) INRA 2013-06-06 Sus scrofa
Sus scrofa domestica
723,520
(45,220 x 16)
16 by_platform
by_series
20 Effect of selection on residual feed intake on gene expression in porcine subcutaneous adipose tissue (20 kg body weight) (GSE47770) [Oligo Array] Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version) (GPL15007) INRA 2013-06-10 Sus scrofa
Sus scrofa domestica
723,520
(45,220 x 16)
16 by_platform
by_series
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