Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(526)		   Primates
(3)		   Rodents
(302)		   Mammals
(71)		   Vertebrates
(43)		   Invertebrates
(64)		   Plants
(568)		   Bacteria
(70)		   Viruses
(2)		   Phages
(0)		   Unclassified
(6)		   All
(1,659)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(1)		   MPSS
(0)		   GeneChip
(2)		   Tiling Array
(0)		   cDNA Array
(28)		   Oligo Array
(40)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(71)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Gene expression in Longissimus lumborum in pig using the GenmascqChip (custom 15K Agilent microarray) (GSE28714) [Oligo Array] [Agilent-019442] Agilent/INRA FH Sus scrofa 15K muscle array [Probe Name version] (GPL11445) INRA 2011-04-19 Sus scrofa
Sus scrofa domestica		 4,942,600
(15,208 x 325) 		325 by_platform
by_series
2 Gene expression in Longissimus lumborum and Semimembranosus skeletal muscles in pig using the GenmascqChip (custom 15K Agilent microarray) (GSE33957) [Oligo Array] [Agilent-019442] Agilent/INRA FH Sus scrofa 15K muscle array [Probe Name version] (GPL11445) INRA 2011-11-26 Sus scrofa
Sus scrofa domestica		 2,737,440
(15,208 x 180) 		180 by_platform
by_series
3 Molecular and functional features demarcate embryonic and induced pluripotent stem cells in rabbits (GSE43403) [Oligo Array] Agilent-037293 rabbit_BDR [Probe name version] (GPL16482) INRA 2013-01-10 Oryctolagus cuniculus
Oryctolagus cuniculus		 2,166,852
(40,884 x 53) 		53 by_platform
by_series
4 Comparisons of caruncles, intercaruncles, AI, IVF-ET and SCNT in pregnancies (GSE14638) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2009-01-29 Bos taurus
Bos taurus		 2,045,952
(27,648 x 74) 		74 by_platform
by_series
5 Gene expression profiling of mammary epithelial cells and their role in the predisposition to Staphylococcus aureus infections (GSE30390) [Oligo Array] Agilent-019921 Sheep Gene Expression Microarray (Feature Number version) (GPL10427) INRA 2011-07-05 Ovis aries
Ovis aries		 1,857,792
(15,744 x 118) 		118 by_platform
by_series
6 Time-course analysis of intestinal postnatal response to IUGR at 0-2 and 5 days (GSE15384) [Oligo Array] Swine Protein-Annotated Oligonucleotide Microarray (GPL7435) National Institute for Agronomical Research (INRA) 2009-03-25 Sus scrofa
Sus scrofa domestica		 1,368,576
(20,736 x 66) 		66 by_platform
by_series
7 AI versus IVF-ET & AI versus SCNT (GSE14050) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2008-12-19 Bos taurus
Bos taurus		 1,216,512
(27,648 x 44) 		44 by_platform
by_series
8 Intramuscular fat variability in pigs (GSE10759) [Oligo Array] INSERM MWG human 23k oligo array_version 3 (GPL6398) INRA 2008-03-07 Sus scrofa
Sus scrofa domestica		 1,112,832
(23,184 x 48) 		48 by_platform
by_series
9 Identification of novel markers of beef sensory quality and muscle growth potential (GSE5561) [Oligo Array] Genopole Mouse oligo array from MWG version 1 (GPL4048) INRA 2006-08-18 Bos taurus
Bos taurus		 1,072,512
(19,152 x 56) 		56 by_platform
by_series
10 Cycle versus Pregnancy (GSE13664) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2008-11-19 Bos taurus
Bos taurus		 995,328
(27,648 x 36) 		36 by_platform
by_series
11 Identification of novel markers of beef sensory quality and muscle growth potential (GSE5561) [Oligo Array] Mouse oligo array from MWG version 2 (GPL4049) INRA 2006-08-18 Bos taurus
Bos taurus		 975,744
(22,176 x 44) 		44 by_platform
by_series
12 The adult boar testicular and epididymal transcriptomes (GSE15614) [cDNA Array] AGENAE_PigGeneric2_9216 (GPL3729) INRA 2009-04-09 Sus scrofa
Sus scrofa domestica		 884,736
(9,216 x 96) 		48 48 by_platform
by_series
13 Comparison between caruncles and intercaruncles in AI, IVF-ET and SCNT pregnancies (GSE14047) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2008-12-19 Bos taurus
Bos taurus		 829,440
(27,648 x 30) 		30 by_platform
by_series
14 Pig Longissimus muscle in Basque and Large White pigs reared in 3 different rearing systems (GSE33958) [Oligo Array] [Agilent-019442] Agilent/INRA FH Sus scrofa 15K muscle array [Probe Name version] (GPL11445) INRA 2011-11-26 Sus scrofa
Sus scrofa domestica		 760,400
(15,208 x 50) 		50 by_platform
by_series
15 Gene expression profiling of BM-derived dendritic cells reveals important mechanisms associated with predisposition to Staphylococcus infections (GSE24448) [Oligo Array] Agilent-019921 Sheep Gene Expression Microarray (Feature Number version) (GPL10427) INRA 2010-09-30 Ovis aries
Ovis aries		 692,736
(15,744 x 44) 		44 by_platform
by_series
16 Transcriptomic analysis of milk somatic cells in mastitis resistant and susceptible sheep upon challenge with Staphylococcus epidermidis and Staphylococcus aureus (GSE24925) [Oligo Array] Agilent-019921 Sheep Gene Expression Microarray (Feature Number version) (GPL10427) INRA 2010-10-26 Ovis aries
Ovis aries		 692,736
(15,744 x 44) 		44 by_platform
by_series
17 Mammary gene expression profile of goats receiving high or low forage diets supplemented or not with lipids (GSE11592) [Oligo Array] URH-TALL_Bovine_Operon V1.1_2 (GPL5451) INRA 2008-05-29 Capra hircus
Capra hircus		 614,400
(19,200 x 32) 		32 by_platform
by_series
18 Pig Longissimus muscle: comparison between Basque and Large White breeds (GSE26614) [Oligo Array] [Agilent-019442] Agilent/INRA FH Sus scrofa 15K muscle array [Probe Name version] (GPL11445) INRA 2011-01-13 Sus scrofa
Sus scrofa domestica		 608,320
(15,208 x 40) 		40 by_platform
by_series
19 Comparison between caruncular and intercaruncular areas in the endometrium of cyclic and pregnant cows (GSE13728) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2008-11-25 Bos taurus
Bos taurus		 552,960
(27,648 x 20) 		20 by_platform
by_series
20 Transcriptome analysis of porcine PMBCs after stimulation by LPS or PMA/ionomycin using SLA-RI/NRSP8-13K chip (GSE17320) [Oligo Array] SLA/Immune Response/NRSP8 Pig 70 mers Oligonucleotides 3.8K + 13.3K v1 (GPL7151) GABI-GIS 2009-07-24 Sus scrofa
Sus scrofa domestica		 537,600
(19,200 x 28) 		28 by_platform
by_series
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