Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(545)		   Primates
(8)		   Rodents
(358)		   Mammals
(33)		   Vertebrates
(31)		   Invertebrates
(73)		   Plants
(201)		   Bacteria
(116)		   Viruses
(0)		   Phages
(0)		   Unclassified
(9)		   All
(1,376)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(10)		   Tiling Array
(0)		   cDNA Array
(9)		   Oligo Array
(14)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(33)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Canine CNVs associated with canFam2 segmental duplications (GSE13266) [Oligo Array] Custom Nimblegen aCGH chip targeted to canFam2 segmental duplications. (GPL7501) University of Washington 2008-10-17 Canis lupus familiaris
Canis lupus familiaris		 7,342,132
(386,428 x 19) 		19 by_platform
by_series
2 Bovine Peyer's Patch Infected with Mycobacterium avium ssp. paratuberculosis and Mycobacterium avium ssp. avium (GSE13888) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) Texas A&M University 2008-12-09 Bos taurus
Bos taurus		 3,870,720
(27,648 x 140) 		140 by_platform
by_series
3 Is Increased Sinusoidal Flow in the Liver Remnant the primary Stimulus to Regeneration after partial Hepatectomy (GSE13683) [cDNA Array] DIAS_PIG_55K3_v1 (GPL3608) University of Aarhus, Faculty of Agrcultural Sciences 2008-11-20 Sus scrofa
Sus scrofa domestica		 2,996,352
(55,488 x 54) 		54 by_platform
by_series
4 Role of SPI-1 Secreted Effectors, SipA, SopABDE2, in Acute Bovine Response to Salmonella enterica Serovar Typhimurium (GSE13847) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) Texas A&M University 2008-12-05 Bos taurus
Bos taurus		 2,322,432
(27,648 x 84) 		84 by_platform
by_series
5 Transcriptional profiling at different sites in lungs of pigs during acute bacterial respiratory infection (GSE13134) [cDNA Array] DJF Pig 55K v1 (GPL6173) Aarhus University, Faculty of Agricultural Sciences 2008-10-09 Sus scrofa
Sus scrofa domestica		 1,942,080
(55,488 x 35) 		35 by_platform
by_series
6 AI versus IVF-ET & AI versus SCNT (GSE14050) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2008-12-19 Bos taurus
Bos taurus		 1,216,512
(27,648 x 44) 		44 by_platform
by_series
7 Gene expression profiles of fasting induced changes in liver and fat tissues of pigs expressing the MC4R D298N variant (GSE13528) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Iowa State University 2008-11-07 Sus scrofa
Sus scrofa domestica		 1,157,904
(24,123 x 48) 		24 24 by_platform
by_series
8 Cycle versus Pregnancy (GSE13664) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2008-11-19 Bos taurus
Bos taurus		 995,328
(27,648 x 36) 		36 by_platform
by_series
9 Gene expression studies to identify skeletal muscle genes related to stress in pigs (GSE13115) [Oligo Array] DIPROVAL - OPERON Sus scrofa AROS V1.0 (GPL5468) Aarhus University, Faculty of Agricultural Sciences 2008-10-08 Sus scrofa
Sus scrofa domestica		 876,096
(24,336 x 36) 		36 by_platform
by_series
10 Comparison between caruncles and intercaruncles in AI, IVF-ET and SCNT pregnancies (GSE14047) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2008-12-19 Bos taurus
Bos taurus		 829,440
(27,648 x 30) 		30 by_platform
by_series
11 Gene expression profiles of progestin-induced canine mammary hyperplasia and spontaneous mammary tumors (GSE13754) [cDNA Array] UMC_VET Canis familiaris 21K cDNA array (GPL5117) Utrecht University 2008-11-26 Canis lupus familiaris
Canis lupus familiaris		 820,512
(22,176 x 37) 		8 29 by_platform
by_series
12 Gene expression profiling of canine osteosarcoma reveals genes associated with short and long survival times (GSE14033) [cDNA Array] UMC_VET Canis familiaris 21K cDNA array (GPL5117) University Utrecht 2008-12-18 Canis lupus familiaris
Canis lupus familiaris		 709,632
(22,176 x 32) 		32 by_platform
by_series
13 Comparison between caruncular and intercaruncular areas in the endometrium of cyclic and pregnant cows (GSE13728) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) INRA 2008-11-25 Bos taurus
Bos taurus		 552,960
(27,648 x 20) 		20 by_platform
by_series
14 Goat mammary gland differentiation during pregnancy (GSE14008) [Oligo Array] BOAC CattleOligo 13.2K + 8.7K 70-mer microarray v1 (GPL6694) INRA Jouy en Josas 2008-12-17 Capra hircus
Capra hircus		 418,176
(23,232 x 18) 		18 by_platform
by_series
15 Validation of the Swine Protein-Annotated Oligonucleotide Microarray. (GSE13095) [Oligo Array] Swine Protein-Annotated Oligonucleotide Microarray (GPL7435) Michigan State University 2008-10-07 Sus scrofa
Sus scrofa domestica		 331,776
(20,736 x 16) 		16 by_platform
by_series
16 Changes in gene expression in gamma delta T cells induced by Yamoa (GSE13320) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) Montana State University 2008-10-23 Bos taurus
Bos taurus		 217,152
(24,128 x 9) 		9 by_platform
by_series
17 Expression profiling of Bos taurus lymph nodes upon infection with Ovine Herpesvirus 2 (GSE13852) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) FGCZ 2008-12-05 Bos taurus
Bos taurus		 217,152
(24,128 x 9) 		9 by_platform
by_series
18 Expression profiling of the host and the Ovine Herpesvirus 2 pathogen during malignant catarrhal fever of cattle (GSE13854) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) FGCZ 2008-12-05 Bos taurus
Bos taurus		 217,152
(24,128 x 9) 		9 by_platform
by_series
19 Molecular prediction of gastrulation stages with small extra-embryonic gene-set (GSE13013) [cDNA Array] INRA-BDR Bovine 10k (GPL7417) INRA 2008-10-02 Bos taurus
Bos taurus		 207,360
(10,368 x 20) 		20 by_platform
by_series
20 Effect of the different protein diets on the intestinal ecosystem (GSE13457) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Sichuan Agricultural University 2008-11-03 Sus scrofa
Sus scrofa domestica		 168,861
(24,123 x 7) 		7 by_platform
by_series
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