||NimbleGen agrsci porcine 2.1M v1
||Aarhus University, Faculty of Agricultural Sciences
||in situ oligonucleotide, NimbleGen agrsci porcine 2.1M v1, Annotation in this record based on the porcine pre genome assembly, version 6 native array description files: Sscorfa_U_Aarhus_CB_cgh_HX1.ndf Sscorfa_U_Aarhus_CB_cgh_HX1.pos
||CASPUR Aristaeus 95K version 1.0
||University of Tuscia
||in situ oligonucleotide, CASPUR Aristaeus 95K version 1.0, High-density (90k) in situ synthesized microarray for Ovis aries, designed by means of a pipeline of software instruments that, starting from unannotated redundant EST sequences deposited at NCBI, selects oligonucleotides suitable for in situ generation on chip. The chip carries 21,743 non-redundant Ovis aries features in quadruplicate, 73.4% of which are fully annotated and correspond to 10,190 genes, thus representing a good coverage of the sheep genome.
||Blomberg Lab Pig Pre-implantation Embryo 40K oligo array
||in situ oligonucleotide, Blomberg Lab Pig Pre-implantation Embryo 40K oligo array, Agilent-016936 Blomberg Swine porcine embryo Arrays of this design have barcodes that begin with 16016936 or 2516936. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
||SR ferret 44K v2.0
||Southern Research Institute
||Mustela putorius furo
||in situ oligonucleotide, SR ferret 44K v2.0,
||Agilent-015354 Bovine Oligo Microarray (4x44K) (Probe Name version)
||in situ oligonucleotide, Agilent-015354 Bovine Oligo Microarray (4x44K) (Probe Name version), Design ID: 015354 Agilent has developed a genome-wide bovine microarray to enable scientists to study gene expression profiling at the global level. Agilent's Bovine Oligo Ã¢â‚¬â€œ 4X44K microarray covers 21,475 unique genes and transcripts of Bos Taurus, two probes for each gene are produced. Oligonucleotides, 60-mers, are synthesized directly on glass slide using the AgilentÃ¢â‚¬â„¢s SurePrint Technology. *** The ID column includes the Agilent Probe Names. A different version of this platform with the Agilent Feature Extraction feature numbers in the ID column is assigned accession number GPL7053.
||Operon Pig 14.4K genome microarray v1.0.2
||University of Alberta
||spotted oligonucleotide, Operon Pig 14.4K genome microarray v1.0.2,
||UIUC Bos taurus 13.2K 70-mer oligoarray (condensed)
||Oregon State University
||W.M. Keck Center, University of Illinois Urbana-Champaign
||spotted oligonucleotide, UIUC Bos taurus 13.2K 70-mer oligoarray (condensed), The 13,257 oligos used in this microarray were obtained from normalized and subtracted cattle placenta and spleen cDNA libraries and based upon the earlier cDNA array platform GPL2864 (Everts et al., 2005 Vet. Immunol. Immunopathol. 105:235-245) and subtracted cDNA libraries created from embryonic (day 36 and day 64) and extra-embryonic (day 14 to 25) tissues (NCBI libraries 15993,15993, and 17188). Positive controls include beta actin (ACTB), glyceraldehyde-3-phosphate dehydrogenase (GAPDH), and hypoxanthine phosphoribosyltransferase (HPRT). Exogenous spiking controls are the soybean genes chlorophyll ab binding protein (CAB), Rubisco small chain 1 (RBS1), and major latex protein (MSG). Negative controls are Cot1 DNA, genomic DNA, spotting buffer, poly-A, and water. All 70-mer oligos were printed in duplicate on the array. Keywords: oligo, cow, placenta, bovine, embryo, microarray
||Cow 4K miRNA LC_MRA-1011_miRCow_14
||in situ oligonucleotide, Cow 4K miRNA LC_MRA-1011_miRCow_14, Cow miRNA microarray with 100% coverage of mature miRNAs listed in miRBase version 14
||University of Pennsylvania
||W.M. Keck Center for comparative and Functional Genomics, University of Illinois at Urbana-Champaign
||Canis lupus familiaris
||spotted DNA/cDNA, UPenn_canine_retinal_EST_4.5k array, GPL9743 represents two different print sets, v1 and v2. While the order of the clones are not exactly the same in v1 and v2, the clones themselves are identical. The Platform data table reflects a condensed representation of the print sets' replicate features. The v1 and v2 full array layout (.gal) files, representing all of the individual features, are linked below as supplementary files.
||Febit Homo Sapiens and Sus Scrofa 1.1K miRBase 13.0
||Freie Universitaet Berlin
||in situ oligonucleotide, Febit Homo Sapiens and Sus Scrofa 1.1K miRBase 13.0, Based on Sanger miRBase Release 13.0 and deep sequencing data.