Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 319716 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 319716 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 319716 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 319716 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 319716 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 319716 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 319716 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57
RSS
Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(1)
  MPSS
(0)
  GeneChip
(333)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(314)
  Bead Array
(0)
  Protein Array
(1)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(970)
 
1   |   2   |   3   |   4   |   5      »      [49]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Genome-wide array comparative genomic hybridization (aCGH) profiling of copy number variations (CNVs) in various dog breeds in comparison to a reference sample (GSE40210) [Tiling Array] NimbleGen Dog Whole-Genome CGH 2.1M Tiling Array (CanFam2_CGH_HX1) (GPL11335) Uppsala University 2012-08-17 Canis lupus familiaris
Canis lupus familiaris
114,718,871
(2,164,507 x 53)
43 10 by_platform
by_series
2 Copy number variation in the porcine genome (GSE19047) [Oligo Array] NimbleGen agrsci porcine 2.1M v1 (GPL9664) Aarhus University, Faculty of Agricultural Sciences 2009-11-16 Sus scrofa
Sus scrofa domestica
102,881,808
(2,143,371 x 48)
48 by_platform
by_series
3 Genome-wide analysis of heritable dog osteosarcoma in 3 breeds (GSE52147) [Bead Array] Illumina CanineHD BeadChip (GPL17481) Broad Institute 2013-11-06 Canis lupus familiaris
Canis lupus familiaris
98,987,340
(173,662 x 570)
570 by_platform
by_series
4 Copy number variation in the bovine genome (GSE18174) [Tiling Array] NimbleGen Agrsci Bovine 6.3M v1, Design 3 (GPL9221) Aarhus University, Faculty of Agricultural Sciences 2009-09-18 Bos taurus
Bos taurus
82,749,303
(2,121,777 x 39)
39 by_platform
by_series
5 Copy number variation in the bovine genome (GSE18174) [Tiling Array] NimbleGen Agrsci Bovine 6.3M v1, Design 1 (GPL9219) Aarhus University, Faculty of Agricultural Sciences 2009-09-18 Bos taurus
Bos taurus
80,898,808
(2,128,916 x 38)
38 by_platform
by_series
6 Copy number variation in the bovine genome (GSE18174) [Tiling Array] NimbleGen Agrsci Bovine 6.3M v1, Design 2 (GPL9220) Aarhus University, Faculty of Agricultural Sciences 2009-09-18 Bos taurus
Bos taurus
79,342,837
(2,144,401 x 37)
37 by_platform
by_series
7 Transcriptome profiling of pig chromosomes regions associated with water holding capacity (GSE52384) [Tiling Array] Agilent-044516 S.Scrofa 1M regional Tiling Array 042564 (GPL17683) Leibniz Institute for Farm Animal Biology 2013-11-14 Sus scrofa
Sus scrofa domestica
48,700,800
(974,016 x 50)
50 by_platform
by_series
8 Dataset #3 for genome-wide analysis of heritable dog osteosarcoma in 3 breeds (GSE51734) [Bead Array] Illumina CanineHD BeadChip (GPL17481) Broad Institute 2013-10-25 Canis lupus familiaris
Canis lupus familiaris
48,278,036
(173,662 x 278)
278 by_platform
by_series
9 Transcriptome profiling of pig chromosomes regions associated with water holding capacity [PiF1]. (GSE52383) [Tiling Array] Agilent-044516 S.Scrofa 1M regional Tiling Array 042564 (GPL17683) Leibniz Institute for Farm Animal Biology 2013-11-14 Sus scrofa
Sus scrofa domestica
26,298,432
(974,016 x 27)
27 by_platform
by_series
10 CGH analyses for the Chinese indigenous pig breeds and commercial pig breeds (GSE46847) [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) China Agriculture University 2013-05-11 Sus scrofa
Sus scrofa domestica
26,013,228
(2,167,769 x 12)
12 by_platform
by_series
11 Dataset #2 for genome-wide analysis of heritable dog osteosarcoma in 3 breeds (GSE51976) [Bead Array] Illumina CanineHD BeadChip (GPL17481) Broad Institute 2013-10-31 Canis lupus familiaris
Canis lupus familiaris
25,528,314
(173,662 x 147)
147 by_platform
by_series
12 Dataset #1 for genome-wide analysis of heritable dog osteosarcoma in 3 breeds (GSE51973) [Bead Array] Illumina CanineHD BeadChip (GPL17481) Broad Institute 2013-10-31 Canis lupus familiaris
Canis lupus familiaris
25,180,990
(173,662 x 145)
145 by_platform
by_series
13 Genome-wide CNVs within and between breeds (GSE26170) [Tiling Array] NimbleGen Dog Whole-Genome CGH 2.1M Tiling Array (CanFam2_CGH_HX1) (GPL11335) University of Washington 2010-12-18 Canis lupus familiaris
Canis lupus familiaris
23,809,577
(2,164,507 x 11)
11 by_platform
by_series
14 Transcriptome profiling of pig chromosomes regions associated with water holding capacity [DuPi] (GSE50846) [Tiling Array] Agilent-044516 S.Scrofa 1M regional Tiling Array 042564 (GPL17683) Leibniz Institute for Farm Animal Biology 2013-09-13 Sus scrofa
Sus scrofa domestica
22,402,368
(974,016 x 23)
23 by_platform
by_series
15 Assessment of genome integrity with array CGH of cattle transgenic cell lines produced by homologous recombination and somatic cell cloning (GSE26132) [Oligo Array] NimbleGen Bos taurus UMD3.0 2.1M WG HD CGH (GPL11314) United States Department of Agriculture 2010-12-16 Bos taurus
Bos taurus
19,498,176
(2,166,464 x 9)
9 by_platform
by_series
16 DNA methylation profiles in the uterus during early pregnancy (GSE43501) [Oligo Array] Agilent-027994 DNZ/UoA_Bovine_~415k_v1 (GPL16270) DairyNZ Ltd 2013-01-15 Bos taurus
Bos taurus
18,409,952
(418,408 x 44)
44 by_platform
by_series
17 Analysis of copy number variations among diverse cattle breeds (GSE19866) [Oligo Array] NimbleGen Bos taurus Btau31 WG CGH (GPL9865) United States Department of Agriculture 2010-01-12 Bos taurus
Bos taurus
17,327,160
(385,048 x 45)
45 by_platform
by_series
18 Analysis of copy number variations among diverse cattle breeds (GSE19866) [Oligo Array] NimbleGen Bos taurus Btau40 WG CGH (GPL9866) United States Department of Agriculture 2010-01-12 Bos taurus
Bos taurus
17,281,125
(384,025 x 45)
45 by_platform
by_series
19 Identification of Copy Number Variants in Dogs (GSE36333) [Oligo Array] Agilent-027178 Dog Whole Ensembl Gene Array 2-2-2010 024881 (GPL15316) Texas A&M University 2012-03-07 Canis lupus familiaris
Canis lupus familiaris
13,028,928
(420,288 x 31)
1 30 by_platform
by_series
20 Copy number variation of individual cattle genomes using next-generation sequencing. (GSE31018) [Oligo Array] NimbleGen Bos taurus UMD3.0 2.1M WG HD CGH (GPL11314) United States Department of Agriculture 2011-07-28 Bos taurus
Bos taurus
10,832,320
(2,166,464 x 5)
5 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [49]