Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(836)
  Primates
(10)
  Rodents
(586)
  Mammals
(39)
  Vertebrates
(49)
  Invertebrates
(184)
  Plants
(231)
  Bacteria
(113)
  Viruses
(2)
  Phages
(0)
  Unclassified
(8)
  All
(2,065)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(12)
  Tiling Array
(3)
  cDNA Array
(6)
  Oligo Array
(11)
  Bead Array
(1)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(6)
  Other
(0)
  All
(39)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Modulation of gene expression in heart and liver of hibernating black bears (Ursus americanus) (GSE27875) [cDNA Array] Wistar Institute Ursus americanus 9.6 k BA02 (GPL13263) Shanghai institute for biology science 2011-03-10 Ursus americanus
Ursus americanus
240,000
(9,600 x 25)
13 12 by_platform
by_series
2 Modulation of gene expression in heart and liver of hibernating black bears (Ursus americanus) (GSE27875) [cDNA Array] Wistar Institute Ursus americanus 9.6 k BA01 (GPL8249) Shanghai institute for biology science 2011-03-10 Ursus americanus
Ursus americanus
96,000
(9,600 x 10)
10 by_platform
by_series
3 Messenger RNA transcript expression in the pig (S. scrofa) (GSE27853) [Oligo Array] CRIBI pig mRNA expression array [Ensembl (Ver. 56) and UniGene (Ver. 38)] (averaged probe version) (GPL13259) University of Padova 2011-03-09 Sus scrofa
Sus scrofa domestica
1,706,124
(60,933 x 28)
8 6 6 2 2 2 2 by_platform
by_series
4 Pathology and Protective Immune Response in Pigs Infected with Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) of High and Low Virulence (GSE26642) [Oligo Array] Swine Protein-Annotated Oligonucleotide Microarray (GPL7435) Michigan State University 2011-01-14 Sus scrofa
Sus scrofa domestica
1,451,520
(20,736 x 70)
34 36 by_platform
by_series
5 Identification of the 3' end of the pig miRNA by the RAKE technology [platform 1: 9003467] (GSE28137) [Tiling Array] CRIBI Tiling array for the identification of 3' end of pig miRNAs (platform 1) (GPL13319) University of Padova 2011-03-23 Sus scrofa
Sus scrofa domestica
1,139,136
(94,928 x 12)
12 by_platform
by_series
6 Identification of the 3' end of the pig miRNA by the RAKE technology [platform 2: 9003179] (GSE28138) [Tiling Array] CRIBI Tiling array for the identification of 3' end of pig miRNAs (platform 2) (GPL13320) University of Padova 2011-03-23 Sus scrofa
Sus scrofa domestica
1,139,136
(94,928 x 12)
12 by_platform
by_series
7 Impact of exercise training on endothelial transcriptional profiles in healthy swine: A genome-wide microarray analysis (GSE26663) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) University of Missouri 2011-01-18 Sus scrofa
Sus scrofa domestica
699,567
(24,123 x 29)
29 by_platform
by_series
8 Pig Longissimus muscle: comparison between Basque and Large White breeds (GSE26614) [Oligo Array] [Agilent-019442] Agilent/INRA FH Sus scrofa 15K muscle array [Probe Name version] (GPL11445) INRA 2011-01-13 Sus scrofa
Sus scrofa domestica
608,320
(15,208 x 40)
40 by_platform
by_series
9 Gene expression in a porcine preadipocyte cell line during differentiation (GSE26907) [Oligo Array] AGP Porcine 44K oligo array v2 AGPOA2 (GPL11664) National Institute of Agrobiological Sciences 2011-01-27 Sus scrofa
Sus scrofa domestica
576,996
(27,476 x 21)
21 by_platform
by_series
10 Genetic variability of transcript abundance in pig peri-mortem skeletal muscle: eQTL localized genes involved in stress response, cell death, muscle disorders and metabolism. (GSE26924) [cDNA Array] AGENAE_PigGeneric2_9216 (GPL3729) INRA 2011-01-28 Sus scrofa
Sus scrofa domestica
525,312
(9,216 x 57)
57 by_platform
by_series
11 Peripheral blood transcriptome responses to Salmonella Typhimurium in pigs differing in Salmonella shedding phenotypes (GSE27000) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Iowa State University 2011-02-01 Sus scrofa
Sus scrofa domestica
482,460
(24,123 x 20)
20 by_platform
by_series
12 Role of enterotoxins in the induction of early immune responses and small-intestinal secretion in ETEC-infected piglets (GSE28003) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Flanders Institute for Biotechnology (VIB) 2011-03-17 Sus scrofa
Sus scrofa domestica
434,214
(24,123 x 18)
6 12 by_platform
by_series
13 The Adaptive Response of Endothelial Cells to Increased Shear Stress (GSE26505) [Oligo Array] Duke Operon Porcine 10.5K Oligo Array (GPL3461) Duke University 2011-01-07 Sus scrofa
Sus scrofa domestica
427,080
(10,677 x 40)
40 by_platform
by_series
14 Expression data of Sham and post-MI myocardium from swine (GSE27962) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) VU University Medical Center 2011-03-15 Sus scrofa
Sus scrofa domestica
385,968
(24,123 x 16)
16 by_platform
by_series
15 differential gene expression in Sensitive and Resistant Pig to Escherichia coli F18 (GSE26854) [cDNA Array] Agilent-020109 Porcine Gene Expression Microarray (44K) (Probe Name version) (GPL10162) Yangzhou university 2011-01-25 Sus scrofa
Sus scrofa domestica
348,824
(43,603 x 8)
8 by_platform
by_series
16 Endothelial Response to Increased Shear Stress Frequency (GSE26513) [Oligo Array] Duke Operon Porcine 10.5K Oligo Array (GPL3461) Duke University 2011-01-10 Sus scrofa
Sus scrofa domestica
298,956
(10,677 x 28)
28 by_platform
by_series
17 Expression data from post mortem porcine skeletal muscle (GSE26701) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Università di Bologna 2011-01-19 Sus scrofa
Sus scrofa domestica
289,476
(24,123 x 12)
12 by_platform
by_series
18 LIF-Dependent, Pluripotent Stem Cells Established from Inner Cell Mass of Porcine Embryos (GSE26436) [Bead Array] Illumina Porcine SNP60 BeadChip (WG-410) (GPL11379) University of Missouri 2011-01-04 Sus scrofa
Sus scrofa domestica
124,326
(62,163 x 2)
2 by_platform
by_series
19 Identification of the 5' end of the pig miRNA by the RAKE technology (GSE28139) [Tiling Array] CRIBI Tiling array for the identification of 5' end of pig miRNAs (GPL13321) University of Padova 2011-03-23 Sus scrofa
Sus scrofa domestica
112,896
(12,544 x 9)
9 by_platform
by_series
20 Evaluation of miRNA expression in 14 different tissues by the RAKE technology (GSE28140) [Oligo Array] CRIBI Pig 2K miRNA array (GPL13322) University of Padova 2011-03-23 Sus scrofa
Sus scrofa domestica
62,720
(2,240 x 28)
8 6 6 2 2 2 2 by_platform
by_series
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