| 1 |
GPL15392 |
Agilent-035654 Canine_murine miRNAv17 |
62,976 |
Zentrum für klinische Tiermedizin |
2012-04-02 |
Agilent Technologies |
Canis lupus familiaris
 |
Oligo Array |
in situ oligonucleotide, Agilent-035654 Canine_murine miRNAv17, Canine and murine miRNAs Agilent miRBase v17 Arrays of this design have barcodes that begin with 16035654 or 2535654. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions. |
| 2 |
GPL3810 |
MSU BLO 8400 |
8,329 |
West Virginia University |
2006-05-25 |
Michigan State University |
Bos taurus
 |
Oligo Array |
spotted oligonucleotide, MSU BLO 8400, |
| 3 |
GPL2113 |
PyxisGenomics CattleArray3800 |
16,896 |
Washington State University |
2005-05-23 |
|
Bos taurus
|
cDNA Array |
spotted DNA/cDNA, PyxisGenomics CattleArray3800, The array elements were selected from cDNA clones derived from expressed sequence tags (ESTs) of bovine spleen and normalized placenta libraries. The ESTs representing distinct genes were determined via sequence similarity searches against human UniGene sequences using an E value of e10-5 as a threshold. The CattleArray3800 contains positive expression controls: beta actin (ACTB); phosphoglycerate kinase 1; (PGK1); hypoxanthine phosphoribosyltransferase (HPRT) and beta-2-microglobulin (B2M). Two exogenous plant genes, soy rubisco small chain 1 (RBS1) and chlorophyll ab binding protein (CAB) can be used as negative or spiking controls. |
| 4 |
GPL13661 |
Canis familiaris V1.0.1 AROS Operon |
26,064 |
Warsaw University of Life Sciences |
2011-05-27 |
Operon |
Canis lupus familiaris
|
Oligo Array |
spotted oligonucleotide, Canis familiaris V1.0.1 AROS Operon, |
| 5 |
GPL5117 |
UMC_VET Canis familiaris 21K cDNA array |
22,176 |
Utrecht University |
2007-04-23 |
Genomics Laboratory, UMC Utrecht,Stratenum, Universiteitsweg 100, 3584 CG Utrecht, The Netherlands |
Canis lupus familiaris
|
cDNA Array |
spotted DNA/cDNA, UMC_VET Canis familiaris 21K cDNA array, Slide Dimensions (LxWxH): 25.3x75.5x1.1 mm |
| 6 |
GPL8322 |
NBFGC Bos taurus 22.8K cDNA microarray |
18,815 |
USDA-ARS-SPARC |
2009-03-18 |
Michigan State University |
Bos taurus
|
cDNA Array |
spotted DNA/cDNA, NBFGC Bos taurus 22.8K cDNA microarray, National Bovine Functional Genomics Consortium cDNA microarray. |
| 7 |
GPL8323 |
BOTL3 Bos taurus 1.4K 7_18_03 |
1,373 |
USDA-ARS-SPARC |
2009-03-18 |
Michigan State University |
Bos taurus
|
cDNA Array |
spotted DNA/cDNA, BOTL3 Bos taurus 1.4K 7_18_03, Bovine Total Leukocyte cDNA microarray Third Generation Microarray Keywords = microarray, cDNA, bovine Also see Platform GPL363 |
| 8 |
GPL9364 |
Blomberg Lab Pig Pre-implantation Embryo 40K oligo array |
45,220 |
USDA-ARS |
2009-10-06 |
Agilent Technologies |
Sus scrofa
 |
Oligo Array |
in situ oligonucleotide, Blomberg Lab Pig Pre-implantation Embryo 40K oligo array, Agilent-016936 Blomberg Swine porcine embryo Arrays of this design have barcodes that begin with 16016936 or 2516936. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions. |
| 9 |
GPL3711 |
USDA Bovine 60mer 344k Array (oligo layout) |
85,235 |
USDA |
2006-05-01 |
NimbleGen |
Bos taurus
|
Oligo Array |
in situ oligonucleotide, USDA Bovine 60mer 344k Array (oligo layout), There are 85235 distinct 60mer oligonucleotides on the array representing ~45383 unique bovine sequences/genes (4 identical spots/features for each 60 oligo). |
| 10 |
GPL3301 |
USDA Bovine 60mer 344k Array (gene layout) |
46,490 |
USDA |
2006-01-04 |
NimbleGen |
Bos taurus
|
Oligo Array |
in situ oligonucleotide, USDA Bovine 60mer 344k Array (gene layout), There are ~ 340,000 features on the array. The 86,191 disinct 60mer oligonucleotides on the array, each represented by 4 features (spots), represent 45,383 unique bovine sequences including 40808 Tentative Consensus sequneces from the TIGR Bos taurus Gene Index (BTGI, release 11.0) and 4,575 singletons from pooled mammary gland and gut library. |
| 11 |
GPL11335 |
NimbleGen Dog Whole-Genome CGH 2.1M Tiling Array (CanFam2_CGH_HX1) |
2,164,507 |
University of Washington |
2010-12-18 |
NimbleGen |
Canis lupus familiaris
|
Tiling Array |
in situ oligonucleotide, NimbleGen Dog Whole-Genome CGH 2.1M Tiling Array (CanFam2_CGH_HX1), gw2.1 genome-wide aCGH, with probes spread across the canFam2 genome assembly with 2164507 probes. designfile: CanFam2_CGH_HX1.ndf designname: CanFam2_CGH_HX1 designid: 7995 Genome build: canFam2 |
| 12 |
GPL7501 |
Custom Nimblegen aCGH chip targeted to canFam2 segmental duplications. |
386,428 |
University of Washington |
2008-10-17 |
Nimblegen |
Canis lupus familiaris
|
Oligo Array |
spotted oligonucleotide, Custom Nimblegen aCGH chip targeted to canFam2 segmental duplications., Segmental duplications were computationally identified and then were targeted with 368,360 probes. The remaining available probes were placed in 5kb flanking regions to the segmental duplications (9,278 probes) and in single copy control regions (8,790 probes). |
| 13 |
GPL11333 |
NimbleGen Dog 137K 12plex CGH array (090529_CanFam_TN_CGH) |
136,929 |
University of Washington |
2010-12-18 |
NimbleGen |
Canis lupus familiaris
|
Oligo Array |
in situ oligonucleotide, NimbleGen Dog 137K 12plex CGH array (090529_CanFam_TN_CGH), A total of 1987 CNV regions with previous evidence of containing a CNV were targeted with 136930 probes. designfile: 090529_CanFam_TN_CGH.ndf designname: 090529_CanFam_TN_CGH designid: 10052 Genome build: canFam2 |
| 14 |
GPL9461 |
CASPUR Aristaeus 95K version 1.0 |
94,928 |
University of Tuscia |
2009-10-19 |
Combimatrix Corporation |
Ovis aries
 |
Oligo Array |
in situ oligonucleotide, CASPUR Aristaeus 95K version 1.0, High-density (90k) in situ synthesized microarray for Ovis aries, designed by means of a pipeline of software instruments that, starting from unannotated redundant EST sequences deposited at NCBI, selects oligonucleotides suitable for in situ generation on chip. The chip carries 21,743 non-redundant Ovis aries features in quadruplicate, 73.4% of which are fully annotated and correspond to 10,190 genes, thus representing a good coverage of the sheep genome. |
| 15 |
GPL13418 |
SHEEPARRAY |
12,193 |
University of Trieste |
2011-04-15 |
University of Verona - Department of Biotechnology - Functional Genomics Centre |
Ovis aries
|
Oligo Array |
in situ oligonucleotide, SHEEPARRAY, |
| 16 |
GPL374 |
ToxExpress GeneChip Canine Array |
12,505 |
University of Pennsylvania |
2003-08-05 |
|
Canis lupus familiaris
|
GeneChip |
in situ oligonucleotide, ToxExpress GeneChip Canine Array, Affymetrix Canis familiaris array. Available commercially from GeneLogic Bethesda, MD. |
| 17 |
GPL3951 |
UPENN_Canis familiaris_4.5K_v1.0 |
9,792 |
University of Pennsylvania |
2006-06-29 |
Microarray Core Facilty, School of Medicine, UPENN. |
Canis lupus familiaris
|
cDNA Array |
spotted DNA/cDNA, UPENN_Canis familiaris_4.5K_v1.0, |
| 18 |
GPL3957 |
UPENN_Canis familiaris_4.5k_v2 |
9,792 |
University of Pennsylvania |
2006-06-29 |
Microarray Core Facility, UPENN |
Canis lupus familiaris
|
cDNA Array |
spotted DNA/cDNA, UPENN_Canis familiaris_4.5k_v2, |
| 19 |
GPL9743 |
UPenn_canine_retinal_EST_4.5k array |
3,527 |
University of Pennsylvania |
2009-12-03 |
W.M. Keck Center for comparative and Functional Genomics, University of Illinois at Urbana-Champaign |
Canis lupus familiaris
|
cDNA Array |
spotted DNA/cDNA, UPenn_canine_retinal_EST_4.5k array, GPL9743 represents two different print sets, v1 and v2. While the order of the clones are not exactly the same in v1 and v2, the clones themselves are identical. The Platform data table reflects a condensed representation of the print sets' replicate features. The v1 and v2 full array layout (.gal) files, representing all of the individual features, are linked below as supplementary files. |
| 20 |
GPL3962 |
UMC ASRC S140 Bos taurus 19.2K cDNA v1 |
19,200 |
University of Missouri-Columbia |
2006-06-30 |
ASRC, S140, University of Missouri-Columbia |
Bos taurus
|
cDNA Array |
spotted DNA/cDNA, UMC ASRC S140 Bos taurus 19.2K cDNA v1, |