Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(545)		   Primates
(8)		   Rodents
(358)		   Mammals
(33)		   Vertebrates
(31)		   Invertebrates
(73)		   Plants
(201)		   Bacteria
(116)		   Viruses
(0)		   Phages
(0)		   Unclassified
(9)		   All
(1,376)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(10)		   Tiling Array
(0)		   cDNA Array
(9)		   Oligo Array
(14)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(33)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Gene expression profiles of progestin-induced canine mammary hyperplasia and spontaneous mammary tumors (GSE13754) [cDNA Array] UMC_VET Canis familiaris 21K cDNA array (GPL5117) Utrecht University 2008-11-26 Canis lupus familiaris
Canis lupus familiaris		 820,512
(22,176 x 37) 		8 29 by_platform
by_series
2 Gene expression profiling of canine osteosarcoma reveals genes associated with short and long survival times (GSE14033) [cDNA Array] UMC_VET Canis familiaris 21K cDNA array (GPL5117) University Utrecht 2008-12-18 Canis lupus familiaris
Canis lupus familiaris		 709,632
(22,176 x 32) 		32 by_platform
by_series
3 Canine CNVs associated with canFam2 segmental duplications (GSE13266) [Oligo Array] Custom Nimblegen aCGH chip targeted to canFam2 segmental duplications. (GPL7501) University of Washington 2008-10-17 Canis lupus familiaris
Canis lupus familiaris		 7,342,132
(386,428 x 19) 		19 by_platform
by_series
4 Peripheral WBC from Brahman and Holstein-Friesian cattle infested with the cattle tick Rhipicephalus microplus (GSE13725) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) University of Queensland 2008-11-24 Bos taurus
Bos taurus		 144,768
(24,128 x 6) 		6 by_platform
by_series
5 Comparative Analyses: Expression Differences for Repair Tissue, Chondrocytes, and Mesenchymal Stromal Cells (GSE14252) [cDNA Array] MacLeod custom equine cartilage cDNA microarray, Version 2 (GPL8016) University of Kentucky 2008-12-31 Equus caballus
Equus caballus		 112,860
(9,405 x 12) 		4 8 by_platform
by_series
6 Transcriptional profiling of equine chondrocyte de-differentiation in culture (GSE14255) [cDNA Array] MacLeod custom equine cartilage cDNA microarray (GPL6423) University of Kentucky 2008-12-31 Equus caballus
Equus caballus		 28,218
(9,406 x 3) 		3 by_platform
by_series
7 Temporal development of necrotizing enterocolitis in the preterm pig (GSE13516) [Oligo Array] Porcine oligonucleotide microarray version 4 (POM4) (Condensed version) (GPL7576) University of Copenhagen 2008-11-07 Sus scrofa
Sus scrofa domestica		 9,516
(366 x 26) 		26 by_platform
by_series
8 Amniotic fluid and necrotizing enterocolitis in preterm pigs (GSE13515) [Oligo Array] Porcine oligonucleotide microarray version 4 (POM4) (Condensed version) (GPL7576) University of Copenhagen 2008-11-07 Sus scrofa
Sus scrofa domestica		 6,222
(366 x 17) 		17 by_platform
by_series
9 Localized Rho GTPase Activation Regulates RNA Dynamics and Compartmentalization in Tumor Cell Protrusions (GSE13253) [GeneChip] [Canine] Affymetrix Canine Genome 1.0 Array (GPL3979) University of British Columbia 2008-10-17 Canis lupus familiaris
Canis lupus familiaris		 143,478
(23,913 x 6) 		6 by_platform
by_series
10 Is Increased Sinusoidal Flow in the Liver Remnant the primary Stimulus to Regeneration after partial Hepatectomy (GSE13683) [cDNA Array] DIAS_PIG_55K3_v1 (GPL3608) University of Aarhus, Faculty of Agrcultural Sciences 2008-11-20 Sus scrofa
Sus scrofa domestica		 2,996,352
(55,488 x 54) 		54 by_platform
by_series
11 Bovine Peyer's Patch Infected with Mycobacterium avium ssp. paratuberculosis and Mycobacterium avium ssp. avium (GSE13888) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) Texas A&M University 2008-12-09 Bos taurus
Bos taurus		 3,870,720
(27,648 x 140) 		140 by_platform
by_series
12 Role of SPI-1 Secreted Effectors, SipA, SopABDE2, in Acute Bovine Response to Salmonella enterica Serovar Typhimurium (GSE13847) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (GPL2853) Texas A&M University 2008-12-05 Bos taurus
Bos taurus		 2,322,432
(27,648 x 84) 		84 by_platform
by_series
13 Effect of the different protein diets on the intestinal ecosystem (GSE13457) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Sichuan Agricultural University 2008-11-03 Sus scrofa
Sus scrofa domestica		 168,861
(24,123 x 7) 		7 by_platform
by_series
14 Comparison between the intestinal developmental process in different sucking phases (GSE13456) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Sichuan Agricultural University 2008-11-03 Sus scrofa
Sus scrofa domestica		 120,615
(24,123 x 5) 		5 by_platform
by_series
15 Changes in gene expression in gamma delta T cells induced by Yamoa (GSE13320) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) Montana State University 2008-10-23 Bos taurus
Bos taurus		 217,152
(24,128 x 9) 		9 by_platform
by_series
16 Changes in gene expression induced by apple polyphenol (APP) (GSE13321) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) Montana State University 2008-10-23 Bos taurus
Bos taurus		 96,512
(24,128 x 4) 		4 by_platform
by_series
17 Validation of the Swine Protein-Annotated Oligonucleotide Microarray. (GSE13095) [Oligo Array] Swine Protein-Annotated Oligonucleotide Microarray (GPL7435) Michigan State University 2008-10-07 Sus scrofa
Sus scrofa domestica		 331,776
(20,736 x 16) 		16 by_platform
by_series
18 Bovine endometrium at day 18 of pregnancy after transfer of in vitro produced or somatic cell nuclear transfer embryos (GSE13663) [cDNA Array] Bovine oviduct and endometrium (BOE) 1.7K cDNA array version 1.2 (GPL7671) Ludwig-Maximilians University of Munich 2008-11-19 Bos taurus
Bos taurus		 32,832
(1,728 x 19) 		19 by_platform
by_series
19 Gene expression profiles of fasting induced changes in liver and fat tissues of pigs expressing the MC4R D298N variant (GSE13528) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Iowa State University 2008-11-07 Sus scrofa
Sus scrofa domestica		 1,157,904
(24,123 x 48) 		24 24 by_platform
by_series
20 Protective response to Brucella infection (GSE13202) [cDNA Array] OSU RIGUA (Ruminant Immuno-inflammatory Gene Universal Array) (GPL6954) Instituto de Investigacion en Recursos Cinegéticos 2008-10-15 Ovis aries
Ovis aries		 36,864
(4,096 x 9) 		9 by_platform
by_series
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