Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(743)		   Primates
(5)		   Rodents
(386)		   Mammals
(31)		   Vertebrates
(51)		   Invertebrates
(187)		   Plants
(209)		   Bacteria
(89)		   Viruses
(1)		   Phages
(0)		   Unclassified
(12)		   All
(1,715)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(16)		   Tiling Array
(0)		   cDNA Array
(4)		   Oligo Array
(9)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(2)		   Other
(0)		   All
(31)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Understanding normal PRRSV infection in lung based on genome-wide transcriptome response identified by deep sequencing (GSE19970) [HT Sequencing] Illumina Genome Analyzer (Sus scrofa) (GPL9126) Sun Yat-sen University 2010-01-20 Sus scrofa
Sus scrofa domestica		 3
(0 x 3) 		3 by_platform
by_series
2 Transcriptional properties of the endometrial macrophage in the pregnant cow (GSE20190) [Oligo Array] Agilent-015354 Bovine Oligo Microarray (4x44K) (Feature Number version) (GPL7053) University of Florida 2010-02-04 Bos taurus
Bos taurus		 723,520
(45,220 x 16) 		8 8 by_platform
by_series
3 Sheep longissimus dorsi (LD) muscle from 40 individual progeny belonging to six Poll Dorset industry sires (GSE20552) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) CSIRO Livestock Industries 2010-02-26 Ovis aries
Ovis aries		 965,120
(24,128 x 40) 		40 by_platform
by_series
4 Molecular Mechanisms Mediating Preconditioning Following Chronic Ischemia Differ from those in Classical Second Window (GSE21096) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) UMDNJ 2010-03-29 Sus scrofa
Sus scrofa domestica		 482,460
(24,123 x 20) 		20 by_platform
by_series
5 MicroRNA expression profiling of the porcine developing brain (GSE20893) [Oligo Array] miRCURY LNA microRNA Array, v. 9.2, all organisms (GPL7724) Faculty of Life Sciences, University of Copenhagen, 2010-03-15 Sus scrofa
Sus scrofa domestica		 35,920
(2,245 x 16) 		16 by_platform
by_series
6 Metastatic Canine Mammary Carcinomas (GSE20718) [GeneChip] [Canine_2] Affymetrix Canine Genome 2.0 Array (GPL3738) Charité-Universitätsmedizin Berlin 2010-03-10 Canis lupus familiaris
Canis lupus familiaris		 1,161,945
(43,035 x 27) 		27 by_platform
by_series
7 Localized complement activation in the development of protective immunity against Ostertagia ostertagi infections in cattle (GSE20927) [Oligo Array] USDA Bovine 60mer 344k Array (gene layout) (GPL3301) USDA 2010-03-17 Bos taurus
Bos taurus		 743,840
(46,490 x 16) 		16 by_platform
by_series
8 Identification of differentially expressed genes in equine endometrium at day 8 and 12 of pregnancy (GSE21046) [Oligo Array] Agilent 4x44k Horse Gene Expression microarrays (AMADID 021322) (GPL10248) Ludwig-Maximilians University of Munich 2010-03-24 Equus caballus
Equus caballus		 994,840
(45,220 x 22) 		22 by_platform
by_series
9 Gene expression profiles in ruminal tissue from cows fed high or low concentrate diets (GSE19802) [Oligo Array] University of Alberta Bovine 24K long oligo array (GPL9862) National Institute of Agrobiological Sciences 2010-01-08 Bos taurus
Bos taurus		 491,520
(49,152 x 10) 		10 by_platform
by_series
10 Gene expression of lipid metabolism-related genes correlated with milk fatty acids in dairy cows (GSE20908) [GeneChip] [Bovine] Affymetrix Bovine Genome Array [CDF: Brainarray Version 11.0.1, Bovine_Bt_REFSEQ] (GPL10186) Animal Breeding and Genomics Centre, Wageningen UR Livestock Research 2010-03-16 Bos taurus
Bos taurus		 643,720
(11,495 x 56) 		56 by_platform
by_series
11 Gene expression in failing and non-failing atrial canine myocardium (GSE20665) [Oligo Array] Agilent-013807 C. familiaris (Dog) Oligo Microarray G2519A option 004 (GPL7543) Johns Hopkins University 2010-03-05 Canis lupus familiaris
Canis lupus familiaris		 797,220
(44,290 x 18) 		18 by_platform
by_series
12 Gene expression differences between the brachial and femoral artery of the Rapacz HC swine (GSE21043) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Purdue University 2010-03-24 Sus scrofa
Sus scrofa domestica		 723,690
(24,123 x 30) 		30 by_platform
by_series
13 Gene Expression Analysis of Deer Antler (GSE20036) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Hospital Nacional de Parapléjicos (SESCAM) 2010-01-25 Cervus elaphus
Cervus elaphus		 2,624,400
(54,675 x 48) 		24 24 by_platform
by_series
14 FBLN1 and FABP4 are drivers of resistance to fleece rot in Australian Merino sheep (GSE21022) [cDNA Array] Ovine-Bovine 12K cDNA array (GPL10240) CSIRO 2010-03-23 Ovis aries
Ovis aries		 752,928
(24,288 x 31) 		31 by_platform
by_series
15 Expression data from Sheep longissimus dorsi (LD) muscle during development (GSE20112) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) CSIRO Livestock Industries 2010-01-29 Ovis aries
Ovis aries		 361,920
(24,128 x 15) 		15 by_platform
by_series
16 Expression data from porcine red and white muscle (GSE19975) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) HZAU 2010-01-20 Sus scrofa
Sus scrofa domestica		 144,738
(24,123 x 6) 		6 by_platform
by_series
17 Expression data from early preimplantation Bovine embryos (GSE21030) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) University of Bonn 2010-03-23 Bos taurus
Bos taurus		 144,768
(24,128 x 6) 		6 by_platform
by_series
18 Expression data from different stages and types of oocytes and cumulus cells (CCs) (GSE21005) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) University of Bonn 2010-03-22 Bos taurus
Bos taurus		 434,304
(24,128 x 18) 		15 3 by_platform
by_series
19 Effects of diet and age on canine colon tissue gene expression (GSE20557) [GeneChip] [Canine] Affymetrix Canine Genome 1.0 Array (GPL3979) University of Illinois 2010-02-28 Canis lupus familiaris
Canis lupus familiaris		 286,956
(23,913 x 12) 		12 by_platform
by_series
20 Direct transcriptomics comparison of pre-weaned bovine mammary parenchyma and fat pad (GSE20363) [Oligo Array] UIUC Bos taurus 13.2K 70-mer oligoarray (condensed) (GPL8776) Oregon State University 2010-02-16 Bos taurus
Bos taurus		 543,537
(13,257 x 41) 		41 by_platform
by_series
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