Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(987)
  Primates
(0)
  Rodents
(490)
  Mammals
(703)
  Vertebrates
(207)
  Invertebrates
(0)
  Plants
(196)
  Bacteria
(227)
  Viruses
(0)
  Phages
(0)
  Unclassified
(42)
  All
(2,852)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(283)
  Tiling Array
(0)
  cDNA Array
(68)
  Oligo Array
(87)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(265)
  Other
(0)
  All
(703)
 
  brain
(0)
  blood
(308)
  connective
(0)
  reproductive
(167)
  muscular
(70)
  digestive
(0)
  liver
(20)
  lung
(8)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(12)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(18)
  unclassified
(100)
  all
(703)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM531779 muscle_pre-training_rep1 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
2 GSM531780 muscle_pre-training_rep2 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
3 GSM531781 muscle_pre-training_rep3 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
4 GSM531782 muscle_post-training_rep1 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
5 GSM531783 muscle_post-training_rep2 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
6 GSM531784 muscle_post-training_rep3 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
7 GSM531785 muscle_pre-training_rep4 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
8 GSM531786 muscle_pre-training_rep5 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
9 GSM531787 muscle_pre-training_rep6 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
10 GSM531788 muscle_pre-training_rep7 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
11 GSM531789 muscle_post-training_rep4 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
12 GSM531790 muscle_post-training_rep5 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
13 GSM531791 muscle_post-training_rep6 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
14 GSM1260298 Muscle_Concentrate_fed_rep7 24,128 University College Dublin 2013-11-06 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
muscle M. longissimus dorsi (LD) muscle
15 GSM1260299 Muscle_grass_fed_rep2 24,128 University College Dublin 2013-11-06 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
muscle M. longissimus dorsi (LD) muscle
16 GSM1260300 Muscle_grass_fed_rep3 24,128 University College Dublin 2013-11-06 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
muscle M. longissimus dorsi (LD) muscle
17 GSM1260301 Muscle_Concentrate_fed_rep2 24,128 University College Dublin 2013-11-06 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
muscle M. longissimus dorsi (LD) muscle
18 GSM1260302 Muscle_Concentrate_fed_rep3 24,128 University College Dublin 2013-11-06 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
muscle M. longissimus dorsi (LD) muscle
19 GSM1260303 Muscle_Concentrate_fed_rep1 24,128 University College Dublin 2013-11-06 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
muscle M. longissimus dorsi (LD) muscle
20 GSM1260304 Muscle_grass_fed_rep4 24,128 University College Dublin 2013-11-06 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
muscle M. longissimus dorsi (LD) muscle
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