Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,356)
  Primates
(665)
  Rodents
(7,771)
  Mammals
(399)
  Vertebrates
(703)
  Invertebrates
(1,567)
  Plants
(3,435)
  Bacteria
(998)
  Viruses
(14)
  Phages
(0)
  Unclassified
(76)
  All
(33,004)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(87)
  Tiling Array
(0)
  cDNA Array
(158)
  Oligo Array
(154)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(399)
 
  brain
(6)
  blood
(33)
  connective
(17)
  reproductive
(71)
  muscular
(76)
  digestive
(0)
  liver
(17)
  lung
(0)
  urinary
(2)
  endo/exo-crine
(12)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(117)
  unclassified
(48)
  all
(399)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM423089 endometrium_mock-treated_rep1 24,128 Ludwig-Maximilian University 2009-06-29 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
uterus endometrial tissue, mock-treated
2 GSM423090 endometrium_mock-treated_rep2 24,128 Ludwig-Maximilian University 2009-06-29 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
uterus endometrial tissue, mock-treated
3 GSM423091 endometrium_mock-treated_rep3 24,128 Ludwig-Maximilian University 2009-06-29 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
uterus endometrial tissue, mock-treated
4 GSM423092 endometrium_estrogen-treated_rep1 24,128 Ludwig-Maximilian University 2009-06-29 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
uterus endometrial tissue, treated with estrogen
5 GSM423093 endometrium_estrogen-treated_rep2 24,128 Ludwig-Maximilian University 2009-06-29 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
uterus endometrial tissue, treated with estrogen
6 GSM423094 endometrium_estrogen-treated_rep3 24,128 Ludwig-Maximilian University 2009-06-29 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
uterus endometrial tissue, treated with estrogen
7 GSM423095 endometrium_progesterone-treated_rep1 24,128 Ludwig-Maximilian University 2009-06-29 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
uterus endometrial tissue, treated with progesterone
8 GSM423096 endometrium_progesterone-treated_rep2 24,128 Ludwig-Maximilian University 2009-06-29 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
uterus endometrial tissue, treated with progesterone
9 GSM423097 endometrium_progesterone-treated_rep3 24,128 Ludwig-Maximilian University 2009-06-29 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
uterus endometrial tissue, treated with progesterone
10 GSM423098 endometrium_progesterone+estrogen-treated_rep1 24,128 Ludwig-Maximilian University 2009-06-29 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
uterus endometrial tissue, treated with progesterone+estrogen
11 GSM423099 endometrium_progesterone+estrogen-treated_rep2 24,128 Ludwig-Maximilian University 2009-06-29 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
uterus endometrial tissue, treated with progesterone+estrogen
12 GSM423100 endometrium_progesterone+estrogen-treated_rep3 24,128 Ludwig-Maximilian University 2009-06-29 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus
uterus endometrial tissue, treated with progesterone+estrogen
13 GSM422412 OBGF400, biological rep 1 24,123 University of Illinois 2009-06-26 [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) RNA Sus scrofa
Sus scrofa domestica
cerebrum OBGF400 (neuroblasts) cell culture
14 GSM422413 OBGF400, biological rep 2 24,123 University of Illinois 2009-06-26 [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) RNA Sus scrofa
Sus scrofa domestica
cerebrum OBGF400 (neuroblasts) cell culture
15 GSM422414 OBGF400, biological rep 3 24,123 University of Illinois 2009-06-26 [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) RNA Sus scrofa
Sus scrofa domestica
cerebrum OBGF400 (neuroblasts) cell culture
16 GSM422415 PK15, biological rep 1 24,123 University of Illinois 2009-06-26 [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) RNA Sus scrofa
Sus scrofa domestica
cerebrum PK15 (non-neuronal, epithelial origin) cell culture
17 GSM422416 PK15, biological rep 2 24,123 University of Illinois 2009-06-26 [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) RNA Sus scrofa
Sus scrofa domestica
cerebrum PK15 (non-neuronal, epithelial origin) cell culture
18 GSM422417 PK15, biological rep 3 24,123 University of Illinois 2009-06-26 [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) RNA Sus scrofa
Sus scrofa domestica
cerebrum PK15 (non-neuronal, epithelial origin) cell culture
19 GSM419915 OAD01_mammary_low_loss_rep1 21,844 DairyNZ 2009-06-23 [Oligo Array] ViaLactia Biosciences custom bovine array 22k version 1b (GPL8618) RNA Bos taurus
Bos taurus
breast mammary, once daily milked, cow 270, low loss mammary, twice daily milked, cow 270, low loss
20 GSM419916 OAD02_mammary_high_loss_rep1 21,844 DairyNZ 2009-06-23 [Oligo Array] ViaLactia Biosciences custom bovine array 22k version 1b (GPL8618) RNA Bos taurus
Bos taurus
breast mammary, once daily milked, cow 99, high loss mammary, twice daily milked, cow 99, high loss
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