Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(37)		   SAGE RsaI
(0)		   SAGE Sau3A
(2)		   MPSS
(0)		   GeneChip
(5,102)		   Tiling Array
(224)		   cDNA Array
(3,525)		   Oligo Array
(5,950)		   Bead Array
(559)		   Protein Array
(5)		   Antibody
(0)		   RT-PCR
(43)		   HT-Seq
(806)		   Other
(7)		   All
(16,260)		  
  brain
(298)		   blood
(2,971)		   connective
(1,191)		   reproductive
(1,078)		   muscular
(2,212)		   digestive
(733)		   liver
(1,449)		   lung
(482)		   urinary
(122)		   endo/exo-crine
(1,006)		   embryo
(759)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(595)		   unclassified
(3,364)		   all
(16,260)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM488105 Qinghai yak, longuissimus dorsi muscle at 36 months, biological rep 1 24,128 National Beef Cattle Improvement Center 2009-12-19 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos grunniens
Bos grunniens		 muscle Qinghai yak, longuissimus dorsi muscle, 36 months
2 GSM488106 Qinghai yak, longuissimus dorsi muscle at 36 months, biological rep 2 24,128 National Beef Cattle Improvement Center 2009-12-19 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos grunniens
Bos grunniens		 muscle Qinghai yak, longuissimus dorsi muscle, 36 months
3 GSM488107 Qinghai yak, longuissimus dorsi muscle at 36 months, biological rep 3 24,128 National Beef Cattle Improvement Center 2009-12-19 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos grunniens
Bos grunniens		 muscle Qinghai yak, longuissimus dorsi muscle, 36 months
4 GSM823609 brain 0 BGI-Shenzhen, Shenzhen 518083, China 2011-10-27 [HT Sequencing] Illumina HiSeq 2000 (Bos grunniens) (GPL14802) SRA Bos grunniens
Bos grunniens		 cerebrum brain
5 GSM823610 heart 0 BGI-Shenzhen, Shenzhen 518083, China 2011-10-27 [HT Sequencing] Illumina HiSeq 2000 (Bos grunniens) (GPL14802) SRA Bos grunniens
Bos grunniens		 heart heart
6 GSM823611 liver 0 BGI-Shenzhen, Shenzhen 518083, China 2011-10-27 [HT Sequencing] Illumina HiSeq 2000 (Bos grunniens) (GPL14802) SRA Bos grunniens
Bos grunniens		 liver/hepato liver
7 GSM823612 lung 0 BGI-Shenzhen, Shenzhen 518083, China 2011-10-27 [HT Sequencing] Illumina HiSeq 2000 (Bos grunniens) (GPL14802) SRA Bos grunniens
Bos grunniens		 lung lung
8 GSM823613 spleen 0 BGI-Shenzhen, Shenzhen 518083, China 2011-10-27 [HT Sequencing] Illumina HiSeq 2000 (Bos grunniens) (GPL14802) SRA Bos grunniens
Bos grunniens		 spleen spleen
9 GSM823614 stomach 0 BGI-Shenzhen, Shenzhen 518083, China 2011-10-27 [HT Sequencing] Illumina HiSeq 2000 (Bos grunniens) (GPL14802) SRA Bos grunniens
Bos grunniens		 stomach stomach
10 GSM344966 WBC Brahman 1 24,128 University of Queensland 2008-11-24 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos indicus
Bos indicus		 peripheral blood White blood cell, peripheral circulation
11 GSM344967 WBC Brahman 2 24,128 University of Queensland 2008-11-24 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos indicus
Bos indicus		 peripheral blood White blood cell, peripheral circulation
12 GSM344968 WBC Brahman 3 24,128 University of Queensland 2008-11-24 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos indicus
Bos indicus		 peripheral blood White blood cell, peripheral circulation
13 GSM385319 Naïve Brahman 1 24,128 University of Queensland 2009-03-23 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos indicus
Bos indicus		 skin Skin biopsy
14 GSM385320 Naïve Brahman 2 24,128 University of Queensland 2009-03-23 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos indicus
Bos indicus		 skin Skin biopsy
15 GSM385321 Naïve Brahman 3 24,128 University of Queensland 2009-03-23 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos indicus
Bos indicus		 skin Skin biopsy
16 GSM385325 Infested Brahman 1 24,128 University of Queensland 2009-03-23 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos indicus
Bos indicus		 skin Skin biopsy
17 GSM385326 Infested Brahman 2 24,128 University of Queensland 2009-03-23 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos indicus
Bos indicus		 skin Skin biopsy
18 GSM385327 Infested Brahman 3 24,128 University of Queensland 2009-03-23 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos indicus
Bos indicus		 skin Skin biopsy
19 GSM928972 CL control - biological rep1 24,128 University of Sao Paulo 2012-05-08 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos indicus
Bos indicus		 unclassified source_name:Non treated- Bovine CL- colected day 6 pos ovulation title:CL control - biological rep1 description:Nelore crossbred cows aged between 2 and 5 years Gene expression data from corpus luteum on day 6 pos ovulation - control animal
20 GSM928973 CL control - biological rep2 24,128 University of Sao Paulo 2012-05-08 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos indicus
Bos indicus		 unclassified source_name:Non treated- Bovine CL- colected day 6 pos ovulation title:CL control - biological rep2 description:Nelore crossbred cows aged between 2 and 5 years Gene expression data from corpus luteum on day 6 pos ovulation - control animal
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