Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(37)
  SAGE RsaI
(0)
  SAGE Sau3A
(2)
  MPSS
(0)
  GeneChip
(6,782)
  Tiling Array
(313)
  cDNA Array
(3,714)
  Oligo Array
(7,645)
  Bead Array
(1,151)
  Protein Array
(5)
  Antibody
(0)
  RT-PCR
(43)
  HT-Seq
(1,197)
  Other
(79)
  All
(20,968)
 
  brain
(433)
  blood
(4,564)
  connective
(1,424)
  reproductive
(1,396)
  muscular
(2,644)
  digestive
(865)
  liver
(1,746)
  lung
(635)
  urinary
(133)
  endo/exo-crine
(1,124)
  embryo
(877)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(628)
  unclassified
(4,499)
  all
(20,968)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM729779 CSL7581 15,743 University of Ferrara 2011-05-24 [Oligo Array] Agilent-018006 Canis familiaris CSL v1 (GPL13637) RNA Zalophus californianus
Zalophus californianus
eye 139_7581_10021_Sadt_F_Corneal_Ulcer_2_4
2 GSM957061 brain 0 BGI-Shenzhen, Shenzhen 518083, China 2012-07-06 [HT Sequencing] Illumina HiSeq 2000 (Tupaia chinensis) (GPL15772) SRA Tupaia chinensis
Tupaia chinensis
cerebrum brain
3 GSM1139107 MS8_Meishan pig 2,167,769 China Agriculture University 2013-05-11 [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve [test] ear tissue [reference] ear tissue
4 GSM1139108 MS7_Meishan pig 2,167,769 China Agriculture University 2013-05-11 [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve [test] ear tissue [reference] ear tissue
5 GSM1139109 Z2_Tibetan pig 2,167,769 China Agriculture University 2013-05-11 [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve [test] ear tissue [reference] ear tissue
6 GSM1139110 A1_wild pig 2,167,769 China Agriculture University 2013-05-11 [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve [test] ear tissue [reference] ear tissue
7 GSM1139111 C3_Landrace 2,167,769 China Agriculture University 2013-05-11 [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve [test] ear tissue [reference] ear tissue
8 GSM1139112 DN1_Diannan small-ear pig 2,167,769 China Agriculture University 2013-05-11 [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve [test] ear tissue [reference] ear tissue
9 GSM1139113 Y2_Yorkshire 2,167,769 China Agriculture University 2013-05-11 [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve [test] ear tissue [reference] ear tissue
10 GSM1139114 R2_Rongchang pig 2,167,769 China Agriculture University 2013-05-11 [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve [test] ear tissue [reference] ear tissue
11 GSM1139115 DN5_Diannan small-ear pig 2,167,769 China Agriculture University 2013-05-11 [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve [test] ear tissue [reference] ear tissue
12 GSM1139116 Z5_Tibetan pig 2,167,769 China Agriculture University 2013-05-11 [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve [test] ear tissue [reference] ear tissue
13 GSM1139117 M2_Min pig 2,167,769 China Agriculture University 2013-05-11 [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve [test] ear tissue [reference] ear tissue
14 GSM1139118 W1_Daweizi pig 2,167,769 China Agriculture University 2013-05-11 [Oligo Array] NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1] (GPL17150) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve [test] ear tissue [reference] ear tissue
15 GSM264275 Breed = Occidental, Day 30 Fetus, BC1 265,635 North Carolina State University 2008-02-07 [GeneChip] Affymetrix GeneChip Porcine Genome Array probe-level (GPL6472) RNA Sus scrofa
Sus scrofa domestica
cerebrum brain
16 GSM264276 Breed = Occidental, Day 30 Fetus, BC2 265,635 North Carolina State University 2008-02-07 [GeneChip] Affymetrix GeneChip Porcine Genome Array probe-level (GPL6472) RNA Sus scrofa
Sus scrofa domestica
cerebrum brain
17 GSM264277 Breed = Occidental, Day 30 Fetus, BC3 265,635 North Carolina State University 2008-02-07 [GeneChip] Affymetrix GeneChip Porcine Genome Array probe-level (GPL6472) RNA Sus scrofa
Sus scrofa domestica
cerebrum brain
18 GSM264278 Breed = Occidental, Day 30 Fetus, BG1 265,635 North Carolina State University 2008-02-07 [GeneChip] Affymetrix GeneChip Porcine Genome Array probe-level (GPL6472) RNA Sus scrofa
Sus scrofa domestica
cerebrum brain
19 GSM264279 Breed = Occidental, Day 30 Fetus, BG2 265,635 North Carolina State University 2008-02-07 [GeneChip] Affymetrix GeneChip Porcine Genome Array probe-level (GPL6472) RNA Sus scrofa
Sus scrofa domestica
cerebrum brain
20 GSM1136290 M2 62,163 China Agriculture University 2013-05-08 [Bead Array] Illumina Porcine SNP60 BeadChip (WG-410) (GPL11379) genomic Sus scrofa
Sus scrofa domestica
peripheral nerve ear tissue
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