Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(11,237)		   Primates
(55)		   Rodents
(3,938)		   Mammals
(293)		   Vertebrates
(491)		   Invertebrates
(722)		   Plants
(2,487)		   Bacteria
(1,010)		   Viruses
(0)		   Phages
(0)		   Unclassified
(83)		   All
(20,316)		  
  SAGE NlaIII
(2)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(108)		   Tiling Array
(0)		   cDNA Array
(148)		   Oligo Array
(35)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(293)		  
  brain
(24)		   blood
(0)		   connective
(8)		   reproductive
(24)		   muscular
(55)		   digestive
(16)		   liver
(3)		   lung
(23)		   urinary
(15)		   endo/exo-crine
(45)		   embryo
(48)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(32)		   all
(293)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM238331 cow_control_biological rep1 24,128 USDA-ARS, BARC 2007-10-17 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus		 breast biopsy of mammary parenchyma, milked twice daily, approx. day 7 of lactation
2 GSM238332 cow_control_biological rep2 24,128 USDA-ARS, BARC 2007-10-17 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus		 breast biopsy of mammary parenchyma, milked twice daily, approx. day 7 of lactation
3 GSM238333 cow_control_biological rep3 24,128 USDA-ARS, BARC 2007-10-17 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus		 breast biopsy of mammary parenchyma, milked twice daily, approx. day 7 of lactation
4 GSM238334 cow_IMF4_biological rep1 24,128 USDA-ARS, BARC 2007-10-17 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus		 breast biopsy of mammary parenchyma, milked 4 times daily beginning at day 4 of lactation, sampled approx. day 7 of lactation
5 GSM238335 cow_IMF4_biological rep2 24,128 USDA-ARS, BARC 2007-10-17 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus		 breast biopsy of mammary parenchyma, milked 4 times daily beginning at day 4 of lactation, sampled approx. day 7 of lactation
6 GSM238336 cow_IMF4_biological rep3 24,128 USDA-ARS, BARC 2007-10-17 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus		 breast biopsy of mammary parenchyma, milked 4 times daily beginning at day 4 of lactation, sampled approx. day 7 of lactation
7 GSM238337 cow_IMF4_biological rep4 24,128 USDA-ARS, BARC 2007-10-17 [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) RNA Bos taurus
Bos taurus		 breast biopsy of mammary parenchyma, milked 4 times daily beginning at day 4 of lactation, sampled approx. day 7 of lactation
8 GSM243334 1490_1x10^4_vs_1490_1x10^5_rep2 17,328 CSIRO 2007-11-16 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Left Hind quarter infused with 1x10^4 Staphylococcus aureus mammary tissue Right Hind quarter infused with 1x10^5 Staphylococcus aureus mammary tissue
9 GSM243335 1490_control_vs_1490_5x10^2_rep1 17,328 CSIRO 2007-11-16 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Control Left Fore quarter mammary tissue Right Fore quarter infused with 5x10^2 Staphylococcus aureus mammary tissue
10 GSM243336 1490_1x10^4_vs_1490_1x10^5_rep1 17,328 CSIRO 2007-11-16 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Left Hind quarter infused with 1x10^4 Staphylococcus aureus mammary tissue Right Hind quarter infused with 1x10^5 Staphylococcus aureus mammary tissue
11 GSM243337 1490_control_vs_1490_1x10^5_rep2 17,328 CSIRO 2007-11-16 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Control Left Fore quarter mammary tissue Right Hind quarter infused with 1x10^5 Staphylococcus aureus mammary tissue
12 GSM243338 1490_5x10^2_vs_1490_1x10^5_rep2 17,328 CSIRO 2007-11-16 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Right Fore quarter infused with 5x10^2 Staphylococcus aureus mammary tissue Right Hind quarter infused with 1x10^5 Staphylococcus aureus mammary tissue
13 GSM243339 1490_control_vs_1490_1x10^4_rep1 17,328 CSIRO 2007-11-16 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Control Left Fore quarter mammary tissue Left Hind quarter infused with 1x10^4 Staphylococcus aureus mammary tissue
14 GSM243340 1490_5x10^2_vs_1490_1x10^5_rep1 17,328 CSIRO 2007-11-16 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Right Fore quarter infused with 5x10^2 Staphylococcus aureus mammary tissue Right Hind quarter infused with 1x10^5 Staphylococcus aureus mammary tissue
15 GSM243341 1490_control_vs_1490_1x10^5_rep1 17,328 CSIRO 2007-11-16 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Control Left Fore quarter mammary tissue Right Hind quarter infused with 1x10^5 Staphylococcus aureus mammary tissue
16 GSM243342 1490_control_vs_1490_1x10^4_rep2 17,328 CSIRO 2007-11-16 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Control Left Fore quarter mammary tissue Left Hind quarter infused with 1x10^4 Staphylococcus aureus mammary tissue
17 GSM243343 1490_5x10^2_vs_1490_1x10^4_rep1 17,328 CSIRO 2007-11-16 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Right Fore quarter infused with 5x10^2 Staphylococcus aureus mammary tissue Left Hind quarter infused with 1x10^4 Staphylococcus aureus mammary tissue
18 GSM243344 1490_control_vs_1490_5x10^2_rep2 17,328 CSIRO 2007-11-16 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Control Left Fore quarter mammary tissue Right Fore quarter infused with 5x10^2 Staphylococcus aureus mammary tissue
19 GSM243345 1490_5x10^2_vs_1490_1x10^4_rep2 17,328 CSIRO 2007-11-16 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Right Fore quarter infused with 5x10^2 Staphylococcus aureus mammary tissue Left Hind quarter infused with 1x10^4 Staphylococcus aureus mammary tissue
20 GSM244665 1592_control_vs_1592_1x10^5_rep2 17,328 CSIRO 2007-11-26 [cDNA Array] CLI Bovine innnate immune array (GPL6082) RNA Bos taurus
Bos taurus		 breast Control Left Fore quarter mammary tissue Left Hind quarter infused with 1x10^5 Staphylococcus aureus mammary tissue
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